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Result Summary

Number of genes 35
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Probe LD14031 Links: Permalink

Genes: Arc70

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
     Apical exclusion
    Cytoplasmic foci
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Pole cell nuclei
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
   Posterior localization
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
 Degraded
  Degraded partially stage 6
  Degradation maternal transcripts
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
    All pole cell nuclei
  Maternal
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Germ cell nuclei
  Localized

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe LD44032 Links: Permalink

Genes: CG10435

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Embryonic localization patterns
    Exclusionary patterns
     Pole plasm excluded
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
    Exclusionary patterns
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
 Degraded
  Degraded partially stage 9
  Degradation maternal transcripts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Sensory system
   Salivary glands
    Salivary glands lumen
   Posterior spiracles
   PNS
   Oenocytes
   Muscles-embryo
   Midgut
   Hindgut
   Germ cell nuclei
    Gonads
     Specific Gonad pattern
   CNS
    Ventral nerve cord
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around PNS nuclei
     Perinuclear around midgut nuclei

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Subcell gonads (maybe).
Low probe on gel. Good in situ.

Probe LP10861 Links: Permalink

Genes: CG13887

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Pole cell localization
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Exclusionary patterns
     Apical exclusion
    Cytoplasmic foci
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
    Cytoplasmic foci
   Germ cell localization
   Embryonic localization patterns
 Degraded
  Degraded partially stage 8
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Perinuclear around yolk nuclei
   Tracheal system
   Salivary glands
  Localized
   Subcellular localization patterns
    Perinuclear localization

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe, a bit weak.
small foci.

Probe LD23532 Links: Permalink

Genes: CG16817

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     Pole plasm
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Maternal
  Localized
   Posterior localization
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
 Degraded
  Degraded partially stage 7
  Degraded partially stage 6
  Degradation maternal transcripts
stage 8-9 Stage 8-9
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe GH06717 Links: Permalink

Genes: CG2930

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Posterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Posterior localization
    Exclusionary patterns
     Pole cell exclusion
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Posterior blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Exclusionary patterns
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in API
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
   Germ cell localization
    Germ cell enrichment
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Midgut
    Midgut subset
   Hindgut
    Specific hindgut area or cells
   Head
   Fat body
   Dorsal vessel
   Atrium
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around midgut nuclei
     Perinuclear around hindgut nuclei
     Perinuclear around fat body nuclei
    Nuclei-associated localization
     Accumulation nuclear subregion
    Cell junction associated

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Anterior and posterior midgut
Good probe, nice in situ.
Anterior and posterior midgut

Probe GH22734 Links: Permalink

Genes: CG30015

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Pair-rule pattern
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
    Apical localization
     Apical enrichment
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Exclusionary patterns
    Cell junction associated
   Posterior localization
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Tracheal pits
   Salivary glands
    Salivary glands lumen
   Pharynx
   Muscles-embryo
    Visceral mesoderm
   Hindgut
    Specific hindgut area or cells
   Head
   Ectoderm
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in tracheal cells
    Cell junction associated
    Basal enrichment
     Basal in hindgut

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel.

Probe LD47780 Links: Permalink

Genes: CG31992

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Strong expression (1-20ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Pole cell localization
     Pole cell enrichment
    Exclusionary patterns
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Strong expression (1-20ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Strong expression (1-20ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
 Degraded
  Degraded partially stage 9
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Germ cell nuclei
    Gonads
     Specific Gonad pattern
     Gonad 'rings'
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel- strong.
Salivary glands, probably non-specific.

Probe GM03763 Links: Permalink

Genes: CG32810

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
 Degraded
  Degraded partially stage 3
  Degradation maternal transcripts
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Pole cell nuclei
    All pole cell nuclei
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
   Pole cell localization
    Pole cell enrichment
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Ectoderm
   CNS
    Ventral nerve cord
   Blastoderm nuclei

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Localized to pole cells, and pole plasm.

Probe RE19835 Links: Permalink

Genes: CG5800

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Exclusionary patterns
     Basal exclusion
     Apical exclusion
    Cytoplasmic foci
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degraded partially stage 4
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 6
   Pole cell nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Apical localization
     Apical enrichment
   Posterior localization
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in neuroblasts
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear subset of nuclei
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
    Apical localization
     Apical enrichment
      Apical Localization Neuroblasts
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
   Oenocytes
   Neuroblasts
    Polarized Neuroblasts
   Midgut
   Hindgut
   Hemocytes
   Germ cell nuclei
    Gonads
   Fat body
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear polarized
     Perinuclear around pole cell nuclei
     Perinuclear around hemocytes
     Perinuclear around fat body nuclei
     Perinuclear 'rings'

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Proventriculus allover
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - Perinuclear
    Midgut - foci
   Specific midgut cells
   Nascent transcript in midgut
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - Nuclear in
     Malpighian tubules - Subnuclear in
    Malpighian tubules - foci
   Nascent transcript in malpighian tubules
   Malpighian tubules allover
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
   Hindgut allover
  Expressed in gastric caeca
   Subcellular localization in gastric caeca
    Gastric caeca - nuclear localization
     Gastric caeca - subnuclear localization
   Nascent transcript in gastric caeca
   Gastric caeca allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - particular area
   Ventral nerve cord - foci or 'dots'
   Localized to axons
  Expressed in brain lobes
   Optic lobe
    Optic lobe subcellular
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - subnuclear
   Salivary gland - Perinuclear
   Salivary gland - nuclear dots
  Nascent transcript in salivary gland
  Expressed in salivary glands
   Salivary glands allover
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Perinuclear
   Nascent transcript in ring gland
   Expressed in ring gland
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
   Expressed in lymph glands
    Lymph glands all over

Adult

Area Images Terms

Comments

Polarized perinuclear with some 'rings' as well at the pole cells. Apical enriched anterior.
Polarized perinuclear
Interesting pattern.
Good probe on gel. Strong.
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions'

Probe AT23411 Links: Permalink

Genes: CG7692

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 5
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Exclusionary patterns
     Pole cell exclusion
    Cytoplasmic foci
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Expression in mesoderm
  Weak expression (>41ms exp)
  Localized
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
    Subset yolk nuclei
     Dorsal yolk nuclei
   Germ cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in amnioserosa
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear subset of nuclei
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
     Intranuclear accumulation
     Accumulation nuclear subregion
     Accumulation in subset nuclei
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Specific tracheal branches
   Salivary glands
   PNS
   Pharynx
   Hemocytes
   Germ cell nuclei
    Gonads
   Ectoderm
   CNS
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
     Perinuclear around hemocytes
    Nuclei-associated localization
     Nuclear in PNS
     Nuclear in hemocytes
     Nuclear in ectoderm
     Nuclear in CNS
     Accumulation nuclear subregion
     Accumulation entire nucleus

Larva

Area Images Terms

Adult

Area Images Terms

Comments

The probe looks good on gel.
Dynamic expression. Salivary glands, probably non-specific

Probe LD13080 Links: Permalink

Genes: Unr

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     RNA islands
     Pole plasm
     Pole buds
    Nuclei associated localization
     Perinuclear localization
      Perinuclear around pole cell nuclei
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Midgut
   CNS
    Ventral nerve cord
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in midgut
      Small Foci in ectoderm
      Small Foci in CNS

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Low probe on gel. Nice insitu. Interesting patterns of localization.
Asymmetric perinuclear localization in pole cells.

Probe GM12270 Links: Permalink

Genes: Cct5

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Basal localization
    Apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Muscles-embryo
    Muscles - subregion
   Midgut
   Hindgut
   Germ cell nuclei
    Gonads
   Ectoderm
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in muscle cells

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe.

Probe RE55932 Links: Permalink

Genes: Chd3

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
     Basal exclusion
     Apical exclusion
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Malpighian tubules
   Ectoderm
   CNS
    Ventral nerve cord
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in Malpighian tubules
      Small Foci in ectoderm
      Small Foci in CNS

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel.

Probe AT25373 Links: Permalink

Genes: Eno

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Strong expression (1-20ms exp)
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     Pole plasm
     Pole buds
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degraded partially stage 4
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
   Posterior localization
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in amnioserosa
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Cytoplasmic foci
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
   Muscles-embryo
   Head
   Ectoderm
  Localized

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Salivary glands, muscles, ectoderm stripes, head.
Pole cells.
The probe looks good on gel Enriched at the pole plasm by stage 3.
Pole cells.

Probe RE54096 Links: Permalink

Genes: FB{}1097

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     Pole plasm
     Pole buds
    Nuclei associated localization
     Perinuclear localization
      Perinuclear around pole cell nuclei
   Embryonic localization patterns
 Degraded
  Degraded partially stage 3
  Degradation maternal transcripts
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 5
   Yolk nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Pole cell nuclei
    Subset pole cell nuclei
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
    Apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 7
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Posterior blastoderm nuclei
     Expression in mesoderm
  Weak expression (>41ms exp)
  Localized
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in API
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Cytoplasmic foci
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   CNS
    Ventral nerve cord
   Blastoderm nuclei
  Localized

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Cytoplasmic foci around pole cells.
Pole plasm and pole buds enriched.

Probe AT20544 Links: Permalink

Genes: Hsp83

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     Pole plasm
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Anterior blastoderm nuclei
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
    Cell junction associated
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
    Anterior localization
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degraded partially stage 4
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Pole cell nuclei
    All pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Posterior blastoderm nuclei
     Anterior blastoderm nuclei
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cell junction associated
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Posterior localization
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
    Anterior localization
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
     Expression in neuroblasts
  Strong expression (1-20ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
     Perinuclear around blastoderm nuclei
    Other subcellular pattern
    Cytoplasmic foci
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
    Ventral localization
    Anterior localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Sensory system
   Segmented pattern
   Salivary glands
   Posterior spiracles
   PNS
   Neuroblasts
    Polarized Neuroblasts
   Midgut
    Midgut subset
   Head
   CNS
    Ventral nerve cord
     Perinuclear VNC
     Nuclear - VNC
     Foci - VNC
   Brain
   Blastoderm nuclei
   Atrium
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around PNS nuclei
     Perinuclear around midgut nuclei
     Perinuclear around CNS nuclei
     Perinuclear 'rings'
    Foci
     Small Foci
      Small Foci in CNS

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Perinuclear localization
    Half moon perinuclear
  Expressed in fat body
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - Perinuclear
    Midgut - foci
  Expressed in gastric caeca
   Nascent transcript in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs few cells - dots
   Leg discs - outside
  Expressed in eye disc
   Eye disc basal
   Eye disc - center round cells
   Expressed in antennal disc
    Antennal disc - localized outside
    Antennal disc - center round cells
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - particular area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - Perinuclear
    Salivary gland - Half moon perinuclear
  Nascent transcript in salivary gland
  Expressed in salivary glands
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Perinuclear
    Ring gland - Cytoplasmic foci
   Nascent transcript in ring gland
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms

Comments

Good probe on gel Goes from all-over to 'posterior enriched'.
Anterior zygotic and posterior maternal expression.

Probe GM14788 Links: Permalink

Genes: Jafrac1

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Exclusionary patterns
     Basal exclusion
     Apical exclusion
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
 Degraded
  Degraded partially stage 9
  Degradation maternal transcripts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Ring gland
   Germ cell nuclei
    Gonads
   Foregut
  Localized
   Subcellular localization patterns

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe SD02332 Links: Permalink

Genes: Prosalpha6

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Embryonic localization patterns
 Degraded
  Degraded partially stage 6
  Degradation maternal transcripts
stage 8-9 Stage 8-9
 Expressed
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
   Germ cell localization
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Ubiquitous

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe.

Probe LD10153 Links: Permalink

Genes: Rad23

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
      Diffuse apical localization
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Non-Expressed

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe CG7434 Links: Permalink

Genes: RpL22

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
stage 6-7 Stage 6-7
 Expressed
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear around all nuclei
stage 8-9 Stage 8-9
 Expressed
  Zygotic
  Ubiquitous
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around yolk nuclei
     Perinuclear around pole cell nuclei
    Exclusionary patterns
     Apical exclusion
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Midgut
   Hindgut
   Foregut
  Ubiquitous
  Medium expression (21-40ms exp)
  Localized

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe CG3922 Links: Permalink

Genes: RpS17

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear around all nuclei
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Pole cell nuclei
    All pole cell nuclei
  Ubiquitous
  Medium expression (21-40ms exp)
  Localized
   Yolk plasm localization
    Yolk plasm enrichment
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
       Perinuclear around blastoderm nuclei
    Cytoplasmic foci
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
    All pole cell nuclei
  Ubiquitous
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear subset of nuclei
     Perinuclear around yolk nuclei
     Perinuclear around pole cell nuclei
    Cytoplasmic foci
   Germ cell localization
    Germ cell enrichment
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Inside Yolk nuclei
   Segmented pattern
  Medium expression (21-40ms exp)
  Localized

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe LD46767 Links: Permalink

Genes: Taf11

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Strong expression (1-20ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
 Degraded
  Degraded partially stage 5
  Degraded partially stage 4
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Maternal
  Localized
   Pole cell localization
    Pole cell enrichment
stage 8-9 Stage 8-9
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
stage 10-17 Stage 10-17
 Expressed

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Re-annotated
Small 'foci'.

Probe tll-E2 Links: Permalink

Genes: tll

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Zygotic
   Zygotic starting stage 3
   Cortical nuclei
    Subset cortical nuclei
     Segmented pattern
      Terminal-gene pattern
     Right flanking nuclei
     Left flanking nuclei
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Terminal-gene pattern
     Right flanking nuclei
     Left flanking nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    Subset yolk nuclei
     Posterior yolk nuclei
   Pole cell nuclei
    All pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Terminal-gene pattern
     Right flanking nuclei
     Left flanking nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
       Perinuclear around blastoderm nuclei
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
    All pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Anterior blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
    Cytoplasmic foci
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
    Anterior localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Inside Yolk nuclei
   Tracheal system
    Tracheal lumen
   Salivary glands
    Salivary glands lumen
   Ring gland
   Midgut
   Hindgut
   Head
   Germ cell nuclei
    Gonads
   Brain
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in other cells
     Accumulation nuclear subregion
    Foci
     Small Foci
      Small Foci in head

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
    Fat body - Few and small foci
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
     Proventriculus - Few foci
   Proventriculus allover
   Particular proventriculus area
  Expressed in midgut
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
   Hindgut allover
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in wing disc
   Wing disc pouch
   Wing disc few cells - dots
   Wing disc allover
  Expressed in leg discs
   Leg discs few cells - dots
   Leg discs allover
  Expressed in eye disc
   Morphogenetic furrow
   Eye disc photo-receptors
   Eye disc few cells - dots
   Eye disc allover
   Expressed in antennal disc
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Localized to axons
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - Perinuclear
    Salivary gland - Half moon perinuclear
   Salivary gland - Cytoplasmic foci
    Salivary gland - Small foci
  Expressed in salivary glands
   Salivary glands allover
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
  Specific testis expression localization
   Larval testis foci
    Testis foci outside-Larva
  Ovary allover
  Expressed in Ovary
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
     Lymph Glands - Few cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms

Comments

Home-made probe to exon 3. Good probe on gel.
Interesting patterns!
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions

Probe RE49802 Links: Permalink

Genes: Top2

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     Pole plasm
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
       Perinuclear around blastoderm nuclei
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 6
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Strong expression (1-20ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around blastoderm nuclei
    Cytoplasmic foci
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
  Strong expression (1-20ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
     Perinuclear around blastoderm nuclei
    Nuclei-associated localization
     Accumulation nuclear subregion
    Cytoplasmic foci
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
   PNS
   CNS
   Brain
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around PNS nuclei
     Perinuclear around CNS nuclei
    Foci
     Small Foci
      Small Foci in CNS

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel Pole plasm enriched, very strong expression (3ms photos). Mild gradient Posterior to Anterior.
Posterior to anterior gradient.
Very specific and dynamic expression. Perinuclear. Salivary glands, probably non-specific.

Probe LD27895 Links: Permalink

Genes: Trf2

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     Pole plasm
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk cortex localization
     Yolk cortex enrichment
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
  Localized
   Pole cell localization
    Pole cell enrichment
stage 8-9 Stage 8-9
 Expressed
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Muscles-embryo
   Head
   Germ cell nuclei
    Gonads
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in muscle cells

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Very low probe on gel. Posterior enriched transcript.
Salivary glands, probably non-specific.
All over, with low pole cell enrichment.

Probe GH07389 Links: Permalink

Genes: ana

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 6
   Yolk Nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in API
     Dorsal blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
       Perinuclear around blastoderm nuclei
    Cytoplasmic foci
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in amnioserosa
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around yolk nuclei
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Tracheal lumen
   Salivary glands
   Proventriculus
   Posterior spiracles
   Midgut
   Head
   CNS
    Ventral nerve cord
     Nuclear - VNC
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in CNS
     Accumulation nuclear subregion
     Accumulation entire nucleus
    Foci
     Small Foci
      Small Foci in midgut

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Amnioserosa cells, cytoplasmic foci. And prinuclear around specific yolk nuclei.
Good probe, nice insitu.
Nuclear localization in ventral nerve cord. Salivary glands, probably non-specific.
Amnioserosa foci, peri-pole cells, head.

Probe RH21245 Links: Permalink

Genes: desat1

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
 Degraded
  Degraded partially stage 3
  Degradation maternal transcripts
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
    Cytoplasmic foci
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'foci'
    Perinuclear around yolk nuclei
   Oenocytes
   Hindgut
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear 'rings'
    Foci
     Small Foci

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Important note: this data was produced with probe 'RE23969'. Consistent with BDGP in situ data Good probe on gel.

Probe RE51676 Links: Permalink

Genes: eIF4G1

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     RNA islands
     Pole plasm
     Pole buds
    Nuclei associated localization
     Perinuclear localization
      Perinuclear around pole cell nuclei
    Cell division apparatus
     Microtubule-associated
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Cell division apparatus
    Apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Basal localization
     Basal enrichment
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Tracheal lumen
   Salivary glands
   Posterior spiracles
   Midgut
   Hindgut
   Blastoderm nuclei
   Amnioserosa
  Localized

Larva

Area Images Terms

Adult

Area Images Terms

Comments

The probe is good but low' Good insitu ------ Intersting expression.
Partly nascent, partly sub-nuclear.
Partly nascent, partly sub-nuclear.

Probe CR43432 Links: Permalink

Genes: marge

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 4-5 Stage 4-5
 Expressed
  Zygotic
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Apical exclusion
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    Subset yolk nuclei
     Ventral yolk nuclei
     Posterior yolk nuclei
     Anterior yolk nuclei
   Pole cell nuclei
    All pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Posterior blastoderm nuclei
     Anterior blastoderm nuclei
  Ubiquitous
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
     Intranuclear accumulation
      Accumulation in subset nuclei
    Cytoplasmic foci
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
    Subset yolk nuclei
     Ventral yolk nuclei
   Germ cell nuclei
    All pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
     Expression in amnioserosa
  Ubiquitous
  Strong expression (1-20ms exp)
  Localized
   Yolk plasm localization
    Yolk plasm enrichment
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear subset of nuclei
     Perinuclear around pole cell nuclei
     Perinuclear around blastoderm nuclei
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Inside Yolk nuclei
   Segmented pattern
  Strong expression (1-20ms exp)
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in other tissues

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe LD30157 Links: Permalink

Genes: msk

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
 Degraded
  Degraded partially stage 7
  Degradation maternal transcripts
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Sensory system
   Segmented pattern
   Salivary glands
    Salivary glands lumen
   PNS
   Oenocytes
   Muscles-embryo
    Muscles - subregion
   Midgut
   Hindgut
    Specific hindgut area or cells
   Head
   Germ cell nuclei
    Gonads
   Fat body
   Ectoderm
   Clypeo-labral bud
   Blastoderm nuclei
   Anal pad
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in PNS
     Accumulation nuclear subregion
     Accumulation entire nucleus
    Foci
     Small Foci
      Small Foci in midgut
      Small Foci in fat body
      Small Foci in ectoderm

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
     Few hindgut foci
    Hindgut basal enrichment
   Hindgut allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Localized to axons
  Expressed in brain lobes
   Brain lobes allover
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Expressed in salivary glands
   Salivary glands allover
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
  Specific testis expression localization
   Larval testis foci
    Testis foci outside-Larva
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
   Expressed in ring gland
    Ring gland allover

Adult

Area Images Terms

Comments

Salivary glands, probably non-specific.
Good probe on gel.
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions.

Probe nanos-RB Links: Permalink

Genes: nanos

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Zygotic
   Pole cell nuclei
    All pole cell nuclei
  Ubiquitous
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     RNA islands
     Pole plasm
     Pole buds
    Cytoplasmic foci
   Embryonic localization patterns
    Yolk plasm localization
    Yolk cortex localization
     Yolk cortex enrichment
 Degraded
  Degraded partially stage 3
  Degraded partially stage 2
  Degradation maternal transcripts
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Yolk nuclei
    Subset yolk nuclei
     Posterior yolk nuclei
   Pole cell nuclei
    All pole cell nuclei
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
       Perinuclear around pole cell nuclei
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Pole cell nuclei
    All pole cell nuclei
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
   Posterior localization
   Pole cell localization
    Pole cell enrichment
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
    All pole cell nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Germ cell nuclei
    Gonads
     Specific Gonad pattern
  Localized
   Subcellular localization patterns
    Other subcellular pattern

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed via HCR-FISH using 3 probe sets targeting the RB transcript isoform
-interesting subcellular localization patterns in the pole/germ cells; makes a great marker for tracking the development of germ line cells throughout the entirety of embryogenesis

Probe RE14873 Links: Permalink

Genes: pgc

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     RNA islands
     Pole plasm
     Pole buds
    Other subcellular pattern
    Nuclei associated localization
     Perinuclear localization
      Perinuclear around pole cell nuclei
    Cell division apparatus
     Other cell division pattern
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 5
   Pole cell nuclei
    Subset pole cell nuclei
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Other subcellular pattern
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cell division apparatus
     Other cell division pattern
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Pole cell nuclei
    Subset pole cell nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Other subcellular pattern
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cell division apparatus
     Other cell division pattern
   Posterior localization
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Other subcellular pattern
    Nuclei-associated localization
    Cell division apparatus
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
    Posterior localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
   Germ cell nuclei
   Blastoderm nuclei
  Localized

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Again, perinuclear pole cell asymmetric expression.
Pole cell asymmetric expression. I see small 'dots' around the pole cells, stronger in one 1/2 of the pole nuclei.
Good probe on gel
Posterior localization, even in unfertilized eggs. RNA accumulates asymmetrically around the pole buds with a 'fiber-like' texture. When nuclei divide, the RNA will stay in the nuclei that are closer to the posterior end. Very interesting!

Probe RE24064 Links: Permalink

Genes: ref(2)P

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei associated localization
     Perinuclear localization
      Perinuclear around pole cell nuclei
      Perinuclear around all nuclei
    Cytoplasmic foci
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Exclusionary patterns
     Basal exclusion
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Discrete apical foci
      Apical clusters
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Anterior blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Discrete apical foci
   Posterior localization
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in API
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
    Cytoplasmic foci
   Germ cell localization
    Germ cell enrichment
 Degraded
  Degraded partially stage 9
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
    Salivary glands - specific region
   Posterior spiracles
   Hindgut
    Specific hindgut area or cells
    Midgut hindgut border
   CNS
    Ventral nerve cord
     Foci - VNC
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in CNS
     Bigger Foci
    Apical enrichment
     Apical enriched hindgut

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe Very interesting localization!
Nice!

Probe CG14792 Links: Permalink

Genes: sta

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
stage 4-5 Stage 4-5
 Expressed
  Zygotic
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear around all nuclei
    Exclusionary patterns
     Apical exclusion
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    Subset yolk nuclei
     Ventral yolk nuclei
   Pole cell nuclei
    All pole cell nuclei
   Blastoderm nuclei
    All blastoderm nuclei
     Persistent widespread
  Ubiquitous
  Strong expression (1-20ms exp)
  Localized
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
       Perinuclear around blastoderm nuclei
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
    Subset yolk nuclei
     Dorsal yolk nuclei
   Germ cell nuclei
    All pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
  Ubiquitous
  Strong expression (1-20ms exp)
  Localized
   Yolk plasm localization
    Yolk plasm enrichment
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear subset of nuclei
     Perinuclear around pole cell nuclei
     Perinuclear around blastoderm nuclei
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Midgut
   Hindgut
   Foregut
   Amnioserosa
  Ubiquitous
  Strong expression (1-20ms exp)
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in midgut
      Small Foci in hindgut
      Small Foci in foregut
      Small Foci in amnioserosa

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe zen-RA Links: Permalink

Genes: zen

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Zygotic
   Zygotic starting stage 3
  Ubiquitous
  Localized
   Subcellular localization patterns
    Nuclei associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Cytoplasmic foci
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Pole cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Posterior blastoderm nuclei
     Dorsal blastoderm nuclei
     Anterior blastoderm nuclei
  Localized
   Subcellular localization patterns
    Yolk cortex localization
     Yolk cortex enrichment
    Ventral localization
    Posterior localization
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around blastoderm nuclei
    Exclusionary patterns
     Yolk plasm exclusion
     Yolk cortex exclusion
    Basal localization
    Apical localization
     Apical enrichment
    Anterior localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Pole cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in ectoderm
     Expression in API
     Dorsal blastoderm nuclei
  Localized
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
       Perinuclear around blastoderm nuclei
     Intranuclear accumulation
      Accumulation in subset nuclei
    Exclusionary patterns
     Yolk plasm exclusion
     Yolk cortex exclusion
    Cytoplasmic foci
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
    Dorsal localization
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in ectoderm
     Expression in API
     Expression in amnioserosa
     Dorsal blastoderm nuclei
  Localized
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Exclusionary patterns
     Yolk plasm exclusion
     Yolk cortex exclusion
    Cytoplasmic foci
    Basal localization
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
    Dorsal localization
 Degraded
  Degraded partially stage 9
stage 10-17 Stage 10-17
 Non-Expressed

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed via HCR-FISH using 3 probe sets targeting the RA transcript isoform
-neat expression patterns in early embryos and early germ band elongation stages; expression is no longer detectable after stage 9-10 (fits modENCODE RNA-seq data well)