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Result Summary

Number of genes	21
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Probe GH26442 Links: Permalink

Genes: CG31534

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Medium expression (21-40ms exp) Maternal Localized Subcellular localization patterns Membrane associated Cell junction associated Embryonic localization patterns Yolk cortex localization Yolk cortex enrichment
stage 4-5		Stage 4-5 Expressed Zygotic Zygotic starting stage 4 Blastoderm nuclei All blastoderm nuclei Maternal Localized Subcellular localization patterns Yolk cortex localization Yolk cortex enrichment Exclusionary patterns Pole cell exclusion Cytoplasmic foci Cell junction associated Apical localization Apical enrichment Discrete apical foci Embryonic localization patterns Degraded Degraded partially stage 4 Degraded completely stage 5 Degradation maternal transcripts
stage 6-7		Stage 6-7 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Random blastoderm nuclei Localized Subcellular localization patterns Cell junction associated Apical localization Apical enrichment Discrete apical foci Local terms for zygotic transcripts Embryonic localization patterns
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Segment polarity pattern Localized Subcellular localization patterns Cell junction associated Apical localization Apical enrichment Diffuse apical localization Local terms for zygotic transcripts Embryonic localization patterns

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Very intersting localization!

Probe GH10162 Links: Permalink

Genes: CG3295

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Medium expression (21-40ms exp) Maternal Localized Subcellular localization patterns Posterior localization RNA islands Pole plasm Anterior localization Embryonic localization patterns
stage 4-5		Stage 4-5 Expressed Maternal Localized Subcellular localization patterns Posterior localization Pole cell localization Pole cell enrichment Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around pole cell nuclei Basal localization Basal enrichment Apical localization Apical enrichment Anterior localization Embryonic localization patterns
stage 6-7		Stage 6-7 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Expression in mesoderm Weak expression (>41ms exp) Localized Subcellular localization patterns Other subcellular pattern Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Basal localization Basal enrichment Embryonic localization patterns
stage 8-9		Stage 8-9 Expressed Weak expression (>41ms exp) Localized Subcellular localization patterns Cell junction associated Basal localization Basal enrichment Apical localization Apical enrichment
stage 10-17		Stage 10-17 Expressed Zygotic Salivary glands Salivary glands lumen Pharynx Muscles-embryo Visceral mesoderm Muscles - subregion Midgut Midgut subset Hindgut Fat body Ectoderm Brain Localized Subcellular localization patterns Perinuclear localization Perinuclear polarized Perinuclear around pharynx nuclei Perinuclear around muscle nuclei Perinuclear around midgut nuclei Basal enrichment Basal in midgut Apical enrichment Apical ectoderm

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Weak probe, good insitu.

Probe AT18914 Links: Permalink

Genes: CG33130

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Ubiquitous Strong expression (1-20ms exp) Maternal
stage 4-5		Stage 4-5 Expressed Strong expression (1-20ms exp) Maternal Localized Subcellular localization patterns Yolk plasm localization Yolk plasm enrichment Nuclei-associated localization Intranuclear accumulation Accumulation nuclear subregion Membrane associated Exclusionary patterns Pole cell exclusion Cytoplasmic foci Cell junction associated Cell division apparatus Basal localization Basal enrichment Embryonic localization patterns
stage 6-7		Stage 6-7 Expressed Weak expression (>41ms exp) Maternal Localized Subcellular localization patterns Membrane associated Exclusionary patterns Cytoplasmic foci Cell junction associated Embryonic localization patterns Exclusionary patterns Pole cell exclusion
stage 8-9		Stage 8-9 Expressed Localized Subcellular localization patterns Membrane associated Cytoplasmic foci Cell junction associated
stage 10-17		Stage 10-17 Expressed Zygotic Yolk nuclei Yolk nuclei 'foci' Inside Yolk nuclei Segmented pattern Salivary glands Salivary glands lumen Muscles-embryo Muscles - subregion Head Ectoderm Dorsal vessel Blastoderm nuclei Amnioserosa Localized Subcellular localization patterns Foci Small Foci Small Foci in other tissues Small Foci in ectoderm Small Foci in dorsal vessel

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Good probe on gel.

Salivary glands, probably non-specific. Small Foci

Probe SD01032 Links: Permalink

Genes: Vsx1

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Non-Expressed
stage 4-5		Stage 4-5 Non-Expressed
stage 6-7		Stage 6-7 Non-Expressed
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Anterior blastoderm nuclei Weak expression (>41ms exp) Localized Subcellular localization patterns Cell junction associated Basal localization Basal enrichment Embryonic localization patterns Anterior localization
stage 10-17		Stage 10-17 Expressed Zygotic Salivary glands Head CNS Ventral nerve cord

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Good probe on gel.

Probe LP04345 Links: Permalink

Genes: CG6234

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Weak expression (>41ms exp) Ubiquitous Maternal Degraded Degraded partially stage 2 Degradation maternal transcripts
stage 4-5		Stage 4-5 Expressed Zygotic Zygotic starting stage 4 Yolk nuclei Subset yolk nuclei Random yolk nuclei Blastoderm nuclei Subset blastoderm nuclei Random blastoderm nuclei Dorsal blastoderm nuclei Medium expression (21-40ms exp) Localized Subcellular localization patterns Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around yolk nuclei Intranuclear accumulation Accumulation nuclear subregion Exclusionary patterns Pole cell exclusion Dorsal localization Cell division apparatus Chromatin associated metaphase Basal localization Basal enrichment Apical localization Embryonic localization patterns
stage 6-7		Stage 6-7 Expressed Zygotic Yolk Nuclei Subset yolk nuclei Random yolk nuclei Localized Subcellular localization patterns Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around yolk nuclei Intranuclear accumulation Accumulation nuclear subregion Embryonic localization patterns Dorsal localization
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Expression in neuroblasts Expression in amnioserosa Localized Subcellular localization patterns Perinuclear localization Perinuclear subset of nuclei Other subcellular pattern Nuclei-associated localization Cell junction associated Embryonic localization patterns Dorsal localization
stage 10-17		Stage 10-17 Expressed Zygotic Yolk nuclei Yolk nuclei 'podia' Perinuclear around yolk nuclei Tracheal system Specific tracheal branches Sensory system Segmented pattern Proventriculus PNS Midgut Midgut subset Hindgut Specific hindgut area or cells Midgut hindgut border Head Ectoderm Polarized Ectoderm Dorsal vessel Dorsal vessel specific pattern CNS Ventral nerve cord Blastoderm nuclei Localized Subcellular localization patterns Perinuclear localization Perinuclear polarized Foci Small Foci Small Foci in ectoderm Bigger Foci Cell junction associated Cell extensions or 'podia'

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Good probe. Amazing insitu! Little maternal.

Sub-cellular localization at the edges of amnioserosa cells.

Great patterns!

Probe LD44815 Links: Permalink

Genes: CG7101

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Weak expression (>41ms exp) Ubiquitous Maternal
stage 4-5		Stage 4-5 Expressed Weak expression (>41ms exp) Maternal Localized Subcellular localization patterns Yolk plasm localization Yolk plasm enrichment Exclusionary patterns Pole cell exclusion Embryonic localization patterns
stage 6-7		Stage 6-7 Expressed Maternal Localized Yolk plasm localization Yolk plasm enrichment Subcellular localization patterns Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around yolk nuclei Basal localization Basal enrichment Embryonic localization patterns
stage 8-9		Stage 8-9 Expressed Localized Subcellular localization patterns Membrane associated Cytoplasmic foci Cell junction associated Basal localization Basal enrichment Embryonic localization patterns
stage 10-17		Stage 10-17 Expressed Zygotic Proventriculus Hemocytes Hemocytes specific area Blastoderm nuclei Localized Subcellular localization patterns Perinuclear localization Perinuclear around hemocytes

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Salivary glands and tracheal lumen, non-specific.

Good probe on gel.

Probe LD35289 Links: Permalink

Genes: CG8003

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Weak expression (>41ms exp) Ubiquitous Maternal
stage 4-5		Stage 4-5 Expressed Weak expression (>41ms exp) Maternal Localized Subcellular localization patterns Yolk plasm localization Yolk plasm enrichment Exclusionary patterns Pole cell exclusion Basal exclusion Apical exclusion Embryonic localization patterns
stage 6-7		Stage 6-7 Expressed Weak expression (>41ms exp) Localized Subcellular localization patterns Cytoplasmic foci Basal localization Basal enrichment Embryonic localization patterns
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Anterior blastoderm nuclei Weak expression (>41ms exp) Localized Subcellular localization patterns Perinuclear localization Perinuclear around blastoderm nuclei Cytoplasmic foci Cell junction associated Basal localization Basal enrichment Embryonic localization patterns
stage 10-17		Stage 10-17 Expressed Zygotic Tracheal system Tracheal lumen Segmented pattern Salivary glands Salivary glands lumen Muscles-embryo Visceral mesoderm Specific visceral mesoderm pattern Midgut Hindgut Specific hindgut area or cells Head Fat body Ectoderm CNS Ventral nerve cord Foci - VNC Blastoderm nuclei Localized Subcellular localization patterns Foci Small Foci Small Foci in tracheal cells Small Foci in other tissues Small Foci in fat body Small Foci in ectoderm Small Foci in CNS Cell junction associated Basal enrichment Basal in ectoderm

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Good probe on gel.

Small foci. Basal enriched.

Probe GM07940 Links: Permalink

Genes: CG9924

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Ubiquitous Strong expression (1-20ms exp) Maternal Degraded Degraded partially stage 3 Degradation maternal transcripts
stage 4-5		Stage 4-5 Expressed Zygotic Zygotic starting stage 4 Blastoderm nuclei Subset blastoderm nuclei Anterior blastoderm nuclei Weak expression (>41ms exp) Maternal Localized Subcellular localization patterns Posterior localization Pole cell localization Pole cell enrichment Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around pole cell nuclei Cytoplasmic foci Embryonic localization patterns Degraded Degraded partially stage 5 Degraded partially stage 4 Degradation maternal transcripts
stage 6-7		Stage 6-7 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Segment polarity pattern Anterior blastoderm nuclei Weak expression (>41ms exp) Localized Subcellular localization patterns Cytoplasmic foci Pole cell localization Pole cell enrichment
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Segment polarity pattern Expression in neuroblasts Expression in mesoderm Anterior blastoderm nuclei Medium expression (21-40ms exp) Localized Subcellular localization patterns Cytoplasmic foci Cell junction associated Germ cell localization Germ cell enrichment
stage 10-17		Stage 10-17 Expressed Zygotic Segmented pattern Neuroblasts Head Head epidermis Ectoderm Blastoderm nuclei Localized Subcellular localization patterns Foci Small Foci Small Foci in ectoderm

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Need more images to get the full story. In situ done in 2006, before we started screening late stage embryos.

Re-annotated

Probe GM07658 Links: Permalink

Genes: Lk6

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Weak expression (>41ms exp) Ubiquitous Maternal Degraded Degraded partially stage 3 Degradation maternal transcripts
stage 4-5		Stage 4-5 Expressed Zygotic Zygotic starting stage 4 Yolk nuclei All yolk nuclei Blastoderm nuclei All blastoderm nuclei Medium expression (21-40ms exp) Localized Subcellular localization patterns Yolk cortex localization Yolk cortex enrichment Membrane associated Cytoplasmic foci Cell junction associated Cell division apparatus Microtubule-associated Basal localization Basal enrichment Local terms for zygotic transcripts Embryonic localization patterns
stage 6-7		Stage 6-7 Expressed Zygotic Yolk Nuclei All yolk nuclei Strong expression (1-20ms exp) Localized Yolk cortex localization Yolk cortex enrichment Subcellular localization patterns Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around yolk nuclei Membrane associated Cell junction associated Basal localization Basal enrichment Local terms for zygotic transcripts Embryonic localization patterns
stage 8-9		Stage 8-9 Expressed Zygotic Yolk nuclei Subset yolk nuclei Random yolk nuclei Strong expression (1-20ms exp) Localized Yolk cortex localization Yolk cortex enrichment Subcellular localization patterns Membrane associated Cell junction associated Basal localization Basal enrichment Local terms for zygotic transcripts Embryonic localization patterns

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

15 ms

51 ms

25 ms

15 ms No zygotic foci, perhaps due to masking by signal from cytoplasmic RNA.

Probe LD22238 Links: Permalink

Genes: Patj

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Ubiquitous Medium expression (21-40ms exp) Maternal
stage 4-5		Stage 4-5 Expressed Ubiquitous Maternal Localized Subcellular localization patterns Cell junction associated
stage 6-7		Stage 6-7 Expressed Maternal Localized Subcellular localization patterns Membrane associated Cell junction associated Apical localization Apical enrichment Discrete apical foci Degraded Degraded partially stage 7 Degradation maternal transcripts
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Expression in amnioserosa Weak expression (>41ms exp) Localized Subcellular localization patterns Membrane associated Cytoplasmic foci Cell junction associated Apical localization Apical enrichment Discrete apical foci Embryonic localization patterns
stage 10-17		Stage 10-17 Expressed Zygotic Tracheal system Tracheal pits Specific tracheal branches Salivary glands Ectoderm Blastoderm nuclei Amnioserosa Localized Subcellular localization patterns Foci Small Foci Small Foci in tracheal cells Small Foci in ectoderm Small Foci in amnioserosa

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Interesting late expression and localization.

Probe RE57705 Links: Permalink

Genes: Wnt8

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Zygotic Zygotic starting stage 3 Cortical nuclei Subset cortical nuclei Segmented pattern Terminal-gene pattern Posterior cortical nuclei Anterior cortical nuclei Weak expression (>41ms exp) Maternal Localized Embryonic localization patterns Exclusionary patterns Yolk cortex exclusion Pole plasm excluded
stage 4-5		Stage 4-5 Expressed Weak expression (>41ms exp) Localized Subcellular localization patterns Posterior localization Exclusionary patterns Pole cell exclusion Dorsal localization Apical localization Apical enrichment Diffuse apical localization Anterior localization Embryonic localization patterns
stage 6-7		Stage 6-7 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Ventral blastoderm nuclei Expression in mesoderm Weak expression (>41ms exp) Localized Subcellular localization patterns Other subcellular pattern Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around blastoderm nuclei
stage 8-9		Stage 8-9 Expressed Localized Subcellular localization patterns Perinuclear localization Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Other subcellular pattern Nuclei-associated localization Cell junction associated Apical localization Apical enrichment Apical Localization Neuroblasts
stage 10-17		Stage 10-17 Expressed Zygotic Salivary glands Proventriculus

Larva

Area	Images	Terms
fat body		3rd Instar Larval Tissues Fat body Subcellular Localization - Fat body Cytoplasmic foci-fat body Expressed in fat body Fat body allover - Ubiquitous
intestine		3rd Instar Larval Tissues Intestine Not expressed in the intestine
imaginal discs		3rd Instar Larval Tissues Imaginal discs Not expressed in imaginal discs
nervous system		3rd Instar Larval Tissues Nervous system Not expressed in nervous system
salivary gland		3rd Instar Larval Tissues Salivary gland Not expressed in salivary glands
lymph glands and ring glands		3rd Instar Larval Tissues Lymph Glands and Ring Glands Ring gland Lymph Glands Not expressed in lymph glands

Adult

Area	Images	Terms

Comments

Degrades.

Very interesting.

Perinuclear around neuroblasts.

Anterior dorsal and posterior dorsal enriched and apically enriched on these cells as well.

Good probe on gel. Amazing in situ.

Probe GH12078 Links: Permalink

Genes: bnb

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Weak expression (>41ms exp) Ubiquitous Maternal Localized Subcellular localization patterns Cell division apparatus
stage 4-5		Stage 4-5 Expressed Zygotic Zygotic starting stage 4 Yolk nuclei Subset yolk nuclei Random yolk nuclei Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Segment polarity pattern Gap-gene pattern Medium expression (21-40ms exp) Localized Subcellular localization patterns Other subcellular pattern Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Intranuclear accumulation Accumulation nuclear subregion Exclusionary patterns Pole cell exclusion Cell division apparatus Apical localization Apical enrichment Diffuse apical localization Apical clusters Embryonic localization patterns
stage 6-7		Stage 6-7 Expressed Zygotic Pole cell nuclei Subset pole cell nuclei Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Gap-gene pattern Expression in ectoderm Medium expression (21-40ms exp) Localized Subcellular localization patterns Nuclei-associated localization Intranuclear accumulation Accumulation nuclear subregion Apical localization Apical enrichment Diffuse apical localization Apical clusters Posterior localization Pole cell localization Pole cell enrichment Embryonic localization patterns
stage 8-9		Stage 8-9 Expressed Zygotic Germ cell nuclei All pole cell nuclei Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Expression in ectoderm Medium expression (21-40ms exp) Localized Subcellular localization patterns Perinuclear localization Other subcellular pattern Nuclei-associated localization Intranuclear accumulation Accumulation nuclear subregion Cell junction associated Apical localization Apical enrichment Germ cell localization Germ cell enrichment Embryonic localization patterns
stage 10-17		Stage 10-17 Expressed Zygotic Tracheal system Tracheal lumen Segmented pattern Salivary glands Midgut Midgut subset Ectoderm Polarized Ectoderm Dorsal vessel CNS Ventral nerve cord Polarized VNC Perinuclear VNC Blastoderm nuclei Amnioserosa Amnioserosa edges Localized Subcellular localization patterns Perinuclear localization Perinuclear polarized Perinuclear around midgut nuclei Perinuclear around ectoderm nuclei Perinuclear around CNS nuclei Nuclei-associated localization Nuclear in other cells Nuclear in ectoderm Accumulation nuclear subregion Accumulation entire nucleus

Larva

Area	Images	Terms

Adult

Area	Images	Terms
Male reproductive tissues

Comments

Good probe. Very nice insitu patterns!

Data from RE10437 probe.

Intra-nuclear in balstoderm and yolk nuclei.

Intranuclear localization. Amnioserosa specific pattern. etc. Salivary glands and tracheal lumen, probably non-specific.

Probe LD24616 Links: Permalink

Genes: cno

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Strong expression (1-20ms exp) Maternal Localized Subcellular localization patterns Membrane associated Cell junction associated Embryonic localization patterns Yolk cortex localization Yolk cortex enrichment Exclusionary patterns Pole plasm excluded
stage 4-5		Stage 4-5 Expressed Zygotic Zygotic starting stage 5 Blastoderm nuclei Subset blastoderm nuclei Dorsal blastoderm nuclei Maternal Localized Subcellular localization patterns Membrane associated Cell junction associated Apical localization Apical enrichment Discrete apical foci Embryonic localization patterns Degraded Degraded partially stage 5 Degraded partially stage 4 Degradation maternal transcripts
stage 6-7		Stage 6-7 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Dorsal blastoderm nuclei Localized Subcellular localization patterns Membrane associated Cell junction associated Apical localization Apical enrichment Discrete apical foci Local terms for zygotic transcripts Degraded Degraded completely stage 7 Degradation maternal transcripts
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Dorsal blastoderm nuclei Localized Subcellular localization patterns Membrane associated Cell junction associated Local terms for zygotic transcripts

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Probe LD14246 Links: Permalink

Genes: dia

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Medium expression (21-40ms exp) Maternal Localized Subcellular localization patterns Other subcellular pattern Membrane associated Cell division apparatus Other cell division pattern Embryonic localization patterns Exclusionary patterns Pole plasm excluded
stage 4-5		Stage 4-5 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Gap-gene pattern Medium expression (21-40ms exp) Maternal Localized Subcellular localization patterns Posterior localization Membrane associated Exclusionary patterns Pole cell exclusion Cell junction associated Basal localization Basal enrichment Apical localization Apical enrichment
stage 6-7		Stage 6-7 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Gap-gene pattern Expression in ectoderm Weak expression (>41ms exp) Localized Subcellular localization patterns Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Membrane associated Exclusionary patterns Cell junction associated Basal localization Basal enrichment Pole cell localization Pole cell enrichment Embryonic localization patterns Exclusionary patterns Pole cell exclusion
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Expression in mesoderm Expression in API Localized Subcellular localization patterns Membrane associated Cell junction associated
stage 10-17		Stage 10-17 Expressed Zygotic Tracheal system Tracheal pits Salivary glands Salivary glands lumen Proventriculus Muscles-embryo Visceral mesoderm Midgut Hindgut Foregut Ectoderm Localized

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Interesting expression in membranes.

Tracheal pits, posterior midgut enriched.

Good probe on gel.

Probe RE29225 Links: Permalink

Genes: gt

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Weak expression (>41ms exp) Ubiquitous Maternal
stage 4-5		Stage 4-5 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Terminal-gene pattern Gap-gene pattern Localized Subcellular localization patterns Basal localization Basal enrichment Degraded Degraded partially stage 5 Degraded partially stage 4 Degradation maternal transcripts
stage 6-7		Stage 6-7 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Terminal-gene pattern Gap-gene pattern Localized Subcellular localization patterns Cell junction associated Basal localization Basal enrichment
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Terminal-gene pattern Localized Subcellular localization patterns Cell junction associated
stage 10-17		Stage 10-17 Expressed Zygotic Salivary glands Salivary glands lumen Head Brain Localized Subcellular localization patterns Membrane associated Cell junction associated

Larva

Area	Images	Terms
intestine		3rd Instar Larval Tissues Intestine Not expressed in the intestine
salivary gland		3rd Instar Larval Tissues Salivary gland Not expressed in salivary glands
ovary and testis		Adult Tissues Male reproductive tissues Testis 3rd Instar Larval Tissues Larval Ovary and Testis-Larva
muscles		3rd Instar Larval Tissues Larval Muscles - larva Not expressed in larval muscles - Larva

Adult

Area	Images	Terms

Comments

Good probe on gel.

Very nice embryonic patterns.

Low expression in larval testis.

-missing late stage patterns; retest candidate for full picture (2025)

Probe RE13908 Links: Permalink

Genes: spo

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Weak expression (>41ms exp) Ubiquitous Maternal
stage 4-5		Stage 4-5 Expressed Zygotic Zygotic starting stage 4 Yolk nuclei All yolk nuclei Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Terminal-gene pattern Random blastoderm nuclei Strong expression (1-20ms exp) Localized Subcellular localization patterns Yolk plasm localization Yolk plasm enrichment Other subcellular pattern Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around yolk nuclei Exclusionary patterns Pole cell exclusion Basal localization Apical localization Apical enrichment Diffuse apical localization Embryonic localization patterns Degraded Degraded partially stage 5 Degradation maternal transcripts
stage 6-7		Stage 6-7 Expressed Zygotic Yolk Nuclei Strong expression (1-20ms exp) Localized Yolk plasm localization Yolk plasm enrichment Subcellular localization patterns Other subcellular pattern Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around yolk nuclei Embryonic localization patterns
stage 8-9		Stage 8-9 Expressed Zygotic Yolk nuclei Subset yolk nuclei Random yolk nuclei Blastoderm nuclei Subset blastoderm nuclei Expression in amnioserosa Strong expression (1-20ms exp) Localized Yolk plasm localization Yolk plasm enrichment Subcellular localization patterns Perinuclear localization Perinuclear subset of nuclei Perinuclear around yolk nuclei Other subcellular pattern Nuclei-associated localization Membrane associated Cytoplasmic foci Cell junction associated Embryonic localization patterns
stage 10-17		Stage 10-17 Expressed Zygotic Yolk nuclei Yolk nuclei 'podia' Salivary glands Ectoderm CNS Ventral nerve cord Localized Subcellular localization patterns Foci Small Foci Small Foci in ectoderm Cell extensions or 'podia'

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Good probe on gel.

Very interesting expression

I see strong peri-nuclear expression around the yolk nuclei, and 'podia' as well.

Very interesting expression!

Salivary glands, probably non-specific.

Probe LD02989 Links: Permalink

Genes: mira

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Non-Expressed
stage 4-5		Stage 4-5 Expressed Zygotic Zygotic starting stage 4 Blastoderm nuclei All blastoderm nuclei Localized Subcellular localization patterns Exclusionary patterns Pole cell exclusion Cell junction associated Apical localization Apical enrichment Diffuse apical localization Embryonic localization patterns
stage 6-7		Stage 6-7 Expressed Zygotic Blastoderm nuclei All blastoderm nuclei Localized Subcellular localization patterns Exclusionary patterns Cell junction associated Apical localization Apical enrichment Diffuse apical localization Embryonic localization patterns Exclusionary patterns Pole cell exclusion
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Expression in neuroblasts Localized Subcellular localization patterns Cell junction associated Apical localization Apical enrichment Diffuse apical localization Apical Localization Neuroblasts Embryonic localization patterns
stage 10-17		Stage 10-17 Expressed Zygotic PNS Neuroblasts Polarized Neuroblasts CNS Ventral nerve cord Polarized VNC Perinuclear VNC Brain Localized Subcellular localization patterns Perinuclear localization Perinuclear polarized Perinuclear around PNS nuclei Perinuclear around CNS nuclei

Larva

Area	Images	Terms
fat body		3rd Instar Larval Tissues Fat body Subcellular Localization - Fat body Cytoplasmic foci-fat body Expressed in fat body Fat body allover - Ubiquitous
intestine		3rd Instar Larval Tissues Intestine Expressed in proventriculus Proventriculus allover Expressed in midgut Subcellular localization in midgut Midgut - foci Midgut allover Expressed in hindgut Subcellular localization in hindgut Hindgut foci Hindgut Axons Expressed in gastric caeca Gastric caeca allover
imaginal discs		3rd Instar Larval Tissues Imaginal discs Expressed in leg discs Leg discs few cells - dots Expressed in eye disc Morphogenetic furrow Eye disc photo-receptors Eye disc few cells - dots Eye disc basal Expressed in antennal disc Antennal disc few cells - dots
nervous system		3rd Instar Larval Tissues Nervous system Expressed in ventral nerve cord Ventral nerve cord - foci or 'dots' Localized to axons Expressed in brain lobes Brain lobes - Foci or dots
salivary gland		3rd Instar Larval Tissues Salivary gland Not expressed in salivary glands Borderline between 'not expressed' and 'low expression'
ovary and testis		Adult Tissues Male reproductive tissues Testis 3rd Instar Larval Tissues Larval Ovary and Testis-Larva Testis allover - Larva Specific testis expression localization Larval testis foci Testis foci outside-Larva
muscles		3rd Instar Larval Tissues Larval Muscles - larva Expressed in larval muscles-Larva Sub-cellular localization in muscles-Larva Larval Muscles - Cytoplasmic foci Muscles allover - Larva
lymph glands and ring glands		3rd Instar Larval Tissues Lymph Glands and Ring Glands Ring gland Ring gland - Subcellular localization Ring gland - Cytoplasmic foci Ring gland - Few and small foci Nascent transcript in ring gland Expressed in ring gland Ring gland allover Lymph Glands Subcellular localization in lymph glands Lymph Glands - Cytoplasmic foci Expressed in lymph glands Lymph glands all over

Adult

Area	Images	Terms

Comments

Nice apical localizatin in neuroblasts during and after delamination.

Zygotically expressed RNA localizes apically and along the lateral membrane. RNA is likely cell junction associated.

It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions.

Probe LD27791 Links: Permalink

Genes: mol

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Weak expression (>41ms exp) Ubiquitous Maternal
stage 4-5		Stage 4-5 Expressed Weak expression (>41ms exp) Ubiquitous Maternal Localized Subcellular localization patterns Basal localization Basal enrichment Degraded Degraded partially stage 5 Degradation maternal transcripts
stage 6-7		Stage 6-7 Expressed Localized Subcellular localization patterns Basal localization Basal enrichment Embryonic localization patterns
stage 8-9		Stage 8-9 Expressed Weak expression (>41ms exp) Localized Subcellular localization patterns Membrane associated Cell junction associated
stage 10-17		Stage 10-17 Expressed Zygotic Sensory system Oenocytes Hemocytes Blastoderm nuclei Localized Subcellular localization patterns Perinuclear localization Perinuclear around hemocytes

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Salivary glands and tracheal lumen, non-specific.

Good probe.

Probe RE57443 Links: Permalink

Genes: ninA

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Ubiquitous Maternal
stage 4-5		Stage 4-5 Expressed Weak expression (>41ms exp) Maternal Localized Subcellular localization patterns Yolk plasm localization Yolk plasm enrichment Exclusionary patterns Pole cell exclusion Basal exclusion Apical exclusion Embryonic localization patterns Degraded Degraded partially stage 5 Degradation maternal transcripts
stage 6-7		Stage 6-7 Expressed Weak expression (>41ms exp) Localized Subcellular localization patterns Cytoplasmic foci
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Expression in neuroblasts Weak expression (>41ms exp) Localized Subcellular localization patterns Cytoplasmic foci Cell junction associated Basal localization Basal enrichment
stage 10-17		Stage 10-17 Expressed Zygotic Proventriculus Ectoderm CNS Ventral nerve cord Brain Blastoderm nuclei Localized Subcellular localization patterns Foci Small Foci Small foci in Proventriculus Small Foci in ectoderm Small Foci in CNS

Larva

Area	Images	Terms
fat body		3rd Instar Larval Tissues Fat body Subcellular Localization - Fat body Cytoplasmic foci-fat body Expressed in fat body Fat body allover - Ubiquitous
intestine		3rd Instar Larval Tissues Intestine Not expressed in the intestine
nervous system		3rd Instar Larval Tissues Nervous system Not expressed in nervous system Borderline between 'not expressed' and 'low expression'
salivary gland		3rd Instar Larval Tissues Salivary gland Not expressed in salivary glands
lymph glands and ring glands		3rd Instar Larval Tissues Lymph Glands and Ring Glands Ring gland Expressed in ring gland Ring gland allover Borderline between 'not expressed' and 'low expression'

Adult

Area	Images	Terms

Comments

Small foci.

Good probe.

Probe LD47350 Links: Permalink

Genes: ovo

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Strong expression (1-20ms exp) Maternal Localized Subcellular localization patterns Posterior localization Pole plasm Nuclei associated localization Perinuclear localization Perinuclear around pole cell nuclei Embryonic localization patterns
stage 4-5		Stage 4-5 Expressed Zygotic Zygotic starting stage 5 Blastoderm nuclei Subset blastoderm nuclei Single stripe Anterior blastoderm nuclei Weak expression (>41ms exp) Maternal Localized Subcellular localization patterns Yolk plasm localization Yolk plasm enrichment Posterior localization Pole cell localization Pole cell enrichment Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around pole cell nuclei Cytoplasmic foci Local terms for zygotic transcripts Embryonic localization patterns Degraded Degraded partially stage 5 Degraded partially stage 4 Degradation maternal transcripts
stage 6-7		Stage 6-7 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Single stripe Anterior blastoderm nuclei Localized Subcellular localization patterns Nuclei-associated localization Perinuclear localization Perinuclear subset of nuclei Perinuclear around pole cell nuclei Cytoplasmic foci Basal localization Basal enrichment Embryonic localization patterns
stage 8-9		Stage 8-9 Expressed Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Expression in amnioserosa Anterior blastoderm nuclei Localized Subcellular localization patterns Cytoplasmic foci Cell junction associated Basal localization Basal enrichment Embryonic localization patterns
stage 10-17		Stage 10-17 Expressed Zygotic Tracheal system Tracheal pits Segmented pattern Salivary glands Salivary glands lumen Head Fat body Ectoderm Blastoderm nuclei Amnioserosa Localized Subcellular localization patterns Foci Small Foci Small Foci in ectoderm Small Foci in amnioserosa Bigger Foci

Larva

Area	Images	Terms

Adult

Area	Images	Terms

Comments

Salivary glands, probably non-specific.

Good probe on gel ovo transcript on X.

Probe LD23793 Links: Permalink

Genes: scra

Embryo

Area	Images	Terms
stage 1-3		Stage 1-3 Expressed Strong expression (1-20ms exp) Maternal Localized Subcellular localization patterns Nuclei associated localization Perinuclear localization Perinuclear around cortical nuclei Perinuclear around all nuclei Membrane associated Cell junction associated Cell division apparatus Microtubule-associated Embryonic localization patterns Yolk cortex localization Yolk cortex enrichment
stage 4-5		Stage 4-5 Expressed Maternal Localized Subcellular localization patterns Posterior localization Cell junction associated Basal localization Basal enrichment Degraded Degraded partially stage 5 Degradation maternal transcripts
stage 6-7		Stage 6-7 Expressed Maternal Localized Subcellular localization patterns Exclusionary patterns Cell junction associated Apical localization Apical enrichment Diffuse apical localization Embryonic localization patterns Exclusionary patterns Pole cell exclusion Degraded Degraded partially stage 7 Degradation maternal transcripts
stage 8-9		Stage 8-9 Expressed Maternal Localized Subcellular localization patterns Cell junction associated Apical localization Apical enrichment Diffuse apical localization Apical Localization Neuroblasts Embryonic localization patterns Degraded