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Result Summary

Number of genes 12
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Probe GH03482 Links: Permalink

Genes: CG10249

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
     Expression in API
  Localized
   Subcellular localization patterns
    Exclusionary patterns
    Cytoplasmic foci
    Apical localization
     Apical enrichment
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Segmented pattern
      Segment polarity pattern
     Expression in neuroblasts
     Anterior blastoderm nuclei
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'foci'
    Inside Yolk nuclei
   Tracheal system
    Specific tracheal branches
   Sensory system
   Segmented pattern
   Salivary glands
    Salivary glands lumen
   Ring gland
   Proventriculus
   Posterior spiracles
    Specific posterior spiracle pattern
   PNS
   Pharynx
   Muscles-embryo
    Muscles - subregion
   Hindgut
    Specific hindgut area or cells
    Midgut hindgut border
   Hemocytes
   Head
   Germ cell nuclei
    Gonads
   Foregut
   Esophagus
   Ectoderm
   CNS
    Ventral nerve cord
     Foci - VNC
     Axons
   Clypeo-labral bud
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around hemocytes
    Nuclei-associated localization
     Accumulation nuclear subregion
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small foci in Proventriculus
      Small Foci in hindgut
      Small Foci in hemocytes
      Small Foci in foregut
      Small Foci in ectoderm
      Small Foci in CNS
    Cell extensions or 'podia'
    Apical enrichment
     Apical enriched hindgut

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good strong probe. Maybe 'small foci'.
Not all zygotic, this gene is on 2R and I see -in many cases- one bright dot per nuclei.
Interesting.

Probe LD29228 Links: Permalink

Genes: CG12880

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
 Degraded
  Degraded partially stage 8
  Degradation maternal transcripts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Ring gland
   Proventriculus
   Pharynx
   Hindgut
    Specific hindgut area or cells
    Midgut hindgut border
   Foregut
   Clypeo-labral bud
   Blastoderm nuclei
   Atrium
   Anal pad
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear polarized
     Perinuclear around proventriculus nuclei
    Cell junction associated

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Midgut allover
  Expressed in malpighian tubules
   Malpighian tubules allover
  Expressed in hindgut
   Hindgut allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Not expressed in imaginal discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Not expressed in nervous system
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Expressed in salivary glands
   Salivary glands allover
  Borderline between 'not expressed' and 'low expression'
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
   Borderline between 'not expressed' and 'low expression'

Adult

Area Images Terms

Comments

Good probe on gel.

Probe CG1440-RB Links: Permalink

Genes: CG1440

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 4-5 Stage 4-5
 Expressed
  Zygotic
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
    Yolk cortex localization
     Yolk cortex enrichment
    Cytoplasmic foci
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    All blastoderm nuclei
  Ubiquitous
  Maternal
  Localized
   Yolk plasm localization
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in neuroblasts
     Expression in mesoderm
     Expression in API
     Expression in amnioserosa
    All blastoderm nuclei
     Transiently widespread
  Ubiquitous
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
 Degraded
  Degraded partially stage 8
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Specific tracheal branches
     Dorsal trunk
   Segmented pattern
   Pharynx
   Neuroblasts
   Midgut
   Head
    Head epidermis
   Ectoderm
    Polarized Ectoderm
   CNS
    Ventral nerve cord
   Clypeo-labral bud
   Brain
   Atrium
   Anal pad
  Ubiquitous

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed via HCR-FISH using 3 probe sets targeting the RB transcript isoform
-appears ubiquitously throughout development with some mesoectodermal enrichment during the germ band elongation phases (appears as stripes)

Probe SD03002 Links: Permalink

Genes: CG2938

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Zygotic starting stage 9
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
 Degraded
  Degraded completely stage 9
  Degradation maternal transcripts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Clypeo-labral bud

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in malpighian tubules
   Malpighian tubules allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Not expressed in imaginal discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Not expressed in nervous system
ovary and testis 3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Specific ovary expression localization
   Ovary foci
    Ovary foci outside
  Expressed in Ovary
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Not expressed in ring gland
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms

Comments

On the X chromosome. One dot inside the nuclei may mean nascent transcript on a male embryo.
Interesting pattern...
Good probe - low.

Probe LD21452 Links: Permalink

Genes: TwdlW

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Non-Expressed
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Segmented pattern
   Salivary glands
    Salivary glands lumen
   Posterior spiracles
    Specific posterior spiracle pattern
   Head
   Ectoderm
   Clypeo-labral bud
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around ectoderm nuclei

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Need more images to get the full story. In situ done before we started screening late stage embryos.
Weak probe on gel.

Probe CR43314-RA Links: Permalink

Genes: CR43314

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 5
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Central band of nuclei
     Anterior blastoderm nuclei
    All blastoderm nuclei
     Transiently widespread
  Ubiquitous
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Exclusionary patterns
     Yolk plasm exclusion
     Yolk cortex exclusion
     Pole cell exclusion
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in ectoderm
     Anterior blastoderm nuclei
  Ubiquitous
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Cytoplasmic foci
   Embryonic localization patterns
    Ventral localization
    Dorsal localization
    Anterior localization
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in ectoderm
     Expression in API
     Anterior blastoderm nuclei
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Accumulation in subset nuclei
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Sensory system
   Posterior spiracles
    Specific posterior spiracle pattern
   PNS
   Midgut
    Midgut subset
   Head
    Head epidermis
   Clypeo-labral bud
   Anal pad
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in PNS
     Nuclear in midgut nuclei
     Nuclear in ectoderm
    Foci
     Small Foci
      Small Foci in PNS
      Small Foci in ectoderm
     Bigger Foci
    Apical enrichment
     Apical ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed via HCR-FISH using 3 probe sets targeting the RA isoform transcript
-quite unique expression pattern that appear as highly localized and nuclear small foci along a strip of the early blastoderm; and as small highly localized foci in the early anterior-dorsal head, API, ventral cephalic furrow; and lastly in ectodermal regions of late stages representing PNS patterns
-images are from two separate experiments using different hairpin-fluorophores for signal amplification but otherwise identical conditions

Probe Frl-RB Links: Permalink

Genes: Frl

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
   Embryonic localization patterns
    Yolk plasm localization
stage 4-5 Stage 4-5
 Expressed
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Yolk cortex localization
    Exclusionary patterns
     Yolk plasm exclusion
 Degraded
  Degraded partially stage 4
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 6
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in ectoderm
    All blastoderm nuclei
     Transiently widespread
  Ubiquitous
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in ectoderm
    All blastoderm nuclei
     Persistent widespread
  Ubiquitous
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Accumulation in subset nuclei
    Cytoplasmic foci
   Embryonic localization patterns
    Ventral localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Segmented pattern
   PNS
   Maxillary complex
   Hindgut
   Germ cell nuclei
    Gonads
   CNS
    Ventral nerve cord
     Perinuclear VNC
     Axons
   Clypeo-labral bud
   Anal pad
  Ubiquitous
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around ectoderm nuclei

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed via HCR-FISH using 3 probe sets targeting the RB transcript isoform
-very diverse expression patterns in the late embryos; possibly expressed in the germ cell

Probe GH03186 Links: Permalink

Genes: Sema-1b

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 5
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Single stripe
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
     Pole cell exclusion
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Apical clusters
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Single stripe
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
       Perinuclear around blastoderm nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Single stripe
     Expression in neuroblasts
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around yolk nuclei
    Nuclei-associated localization
     Intranuclear accumulation
     Accumulation nuclear subregion
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
   Tracheal system
   Hindgut
    Specific hindgut area or cells
   Head
   Ectoderm
   CNS
    Ventral nerve cord
     Foci - VNC
   Clypeo-labral bud
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small Foci in hindgut
      Small Foci in ectoderm
      Small Foci in CNS
    Apical enrichment
     Apical ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good strong probe on gel.

Probe dac-RB Links: Permalink

Genes: dac

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Non-Expressed
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in neuroblasts
     Expression in ectoderm
     Anterior blastoderm nuclei
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
   Embryonic localization patterns
    Anterior localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Sensory system
   Optic lobes primordium
   Muscles-embryo
    Visceral mesoderm
     Specific visceral mesoderm pattern
   Maxillary complex
   Hindgut
    Specific hindgut area or cells
   Esophagus
   CNS
    Ventral nerve cord
     Perinuclear VNC
     Foci - VNC
   Clypeo-labral bud
   Brain
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around hindgut nuclei
     Perinuclear around esophagus nuclei
    Foci
     Small Foci
      Small Foci in hindgut
      Small Foci in CNS
      Small Foci in Brain

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed using HCR-FISH (3 probe sets)
-probes targeted dac-RB isoform of transcript
-very neat patterning in later stages; possibly visceral muscles of the hindgut

Probe LP09339 Links: Permalink

Genes: ect

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
  Maternal
stage 8-9 Stage 8-9
 Expressed
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Tracheal lumen
    Specific tracheal branches
    Polarized tracheal localization
   Segmented pattern
   Salivary glands
    Salivary glands - specific region
   Proventriculus
   Posterior spiracles
    Specific posterior spiracle pattern
   Pharynx
   Hindgut
    Specific hindgut area or cells
   Head
   Foregut
   Esophagus
   Ectoderm
    Polarized Ectoderm
   CNS
    Ventral nerve cord
   Clypeo-labral bud
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear polarized
     Perinuclear around tracheal nuclei
     Perinuclear around proventriculus nuclei
     Perinuclear around esophagus nuclei
    Nuclei-associated localization
     Nuclear in pharynx
     Nuclear in other cells
     Nuclear in ectoderm
     Accumulation nuclear subregion
     Accumulation entire nucleus
    Cell junction associated
    Apical enrichment
     Apical ectoderm

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
     Malpighian tubules few foci
   Malpighian tubules allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Not expressed in imaginal discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Brain lobes allover
  Borderline between 'not expressed' and 'low expression'
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Expressed in salivary glands
   Salivary glands allover
  Borderline between 'not expressed' and 'low expression'
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
     Lymph Glands - Few cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms

Comments

Maybe some 'foci'.
Nuclear - posterior spiracles Salivary glands, probably non-specific.
Lowish probe on gel. Good in situ!

Probe LD30157 Links: Permalink

Genes: msk

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
 Degraded
  Degraded partially stage 7
  Degradation maternal transcripts
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Sensory system
   Segmented pattern
   Salivary glands
    Salivary glands lumen
   PNS
   Oenocytes
   Muscles-embryo
    Muscles - subregion
   Midgut
   Hindgut
    Specific hindgut area or cells
   Head
   Germ cell nuclei
    Gonads
   Fat body
   Ectoderm
   Clypeo-labral bud
   Blastoderm nuclei
   Anal pad
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in PNS
     Accumulation nuclear subregion
     Accumulation entire nucleus
    Foci
     Small Foci
      Small Foci in midgut
      Small Foci in fat body
      Small Foci in ectoderm

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
     Few hindgut foci
    Hindgut basal enrichment
   Hindgut allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Localized to axons
  Expressed in brain lobes
   Brain lobes allover
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Expressed in salivary glands
   Salivary glands allover
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
  Specific testis expression localization
   Larval testis foci
    Testis foci outside-Larva
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
   Expressed in ring gland
    Ring gland allover

Adult

Area Images Terms

Comments

Salivary glands, probably non-specific.
Good probe on gel.
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions.

Probe prd-RA Links: Permalink

Genes: prd

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Single stripe
     Segmented pattern
      Segment polarity pattern
      Pair-rule pattern
     Dorsal blastoderm nuclei
     Anterior blastoderm nuclei
  Localized
   Subcellular localization patterns
    Ventral localization
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Dorsal localization
    Cytoplasmic foci
    Apical localization
     Apical enrichment
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Segmented pattern
      Segment polarity pattern
     Posterior blastoderm nuclei
     Expression in ectoderm
     Dorsal blastoderm nuclei
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Apical localization
     Apical enrichment
   Posterior localization
   Embryonic localization patterns
    Ventral localization
    Dorsal localization
 Degraded
  Degraded partially stage 7
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Zygotic starting stage 9
   Zygotic starting stage 8
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Segmented pattern
      Segment polarity pattern
     Expression in ectoderm
     Dorsal blastoderm nuclei
 Degraded
  Degraded partially stage 8
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Sensory system
   PNS
   Maxillary complex
   Head
    Head epidermis
   Clypeo-labral bud
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around PNS nuclei

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed via HCR-FISH using 3 probe sets targeting the RA isoform transcript
-retested recently for late stage coverage (2025); appears to be expressed in a different program in the gnathal elements and sensory regions in late stages