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Result Summary

Number of genes 24
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Probe RE28720 Links: Permalink

Genes: CG12643

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
  Localized
   Embryonic localization patterns
    Yolk cortex localization
     Yolk cortex enrichment
stage 4-5 Stage 4-5
 Expressed
  Localized
   Subcellular localization patterns
    Pole cell localization
     Pole cell enrichment
    Cytoplasmic foci
    Apical localization
     Apical enrichment
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Localized
   Subcellular localization patterns
    Apical localization
     Apical enrichment
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Apical localization
     Apical enrichment
stage 10-17 Stage 10-17
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Localized
   Subcellular localization patterns
    Apical enrichment
     Apical in other tissues
     Apical ectoderm

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Perinuclear localization
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus membrane
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - Perinuclear
    Midgut - foci
    Midgut - Basal midgut
   Specific midgut cells
   Midgut allover
  Expressed in hindgut
   Hindgut allover
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs allover
   Leg discs - outside
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - apical
  Expressed in salivary glands
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
tracheal system 3rd Instar Larval Tissues
 Tracheal System
  Expressed in tracheal tubes
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Expressed in lymph glands

Adult

Area Images Terms

Comments

Good probe on gel.
Probe to gene link created manually.
Nice Apical example.

Probe LD21241 Links: Permalink

Genes: CG14217

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
     RNA islands
     Pole plasm
     Pole buds
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Maternal
  Localized
   Pole cell localization
    Pole cell enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Maternal
  Localized
   Germ cell localization
    Germ cell enrichment
   Embryonic localization patterns
    Posterior localization

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in genital disc
  Expressed in eye disc
   Morphogenetic furrow
   Eye disc few cells - dots
   Eye disc apical
   Eye disc allover
   Expressed in antennal disc
    Antennal disc few cells - dots
    Antennal disc - localized outside
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Localized to axons
  Expressed in brain lobes
   Mushroom body
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms

Comments

It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions'

Probe RE29678 Links: Permalink

Genes: CG14572

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Non-Expressed
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Non-Expressed

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus membrane
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - membrane
    Midgut - Basal midgut
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
  Expressed in gastric caeca
   Subcellular localization in gastric caeca
    Gastric caeca foci
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs particular pattern
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary glands allover
tracheal system 3rd Instar Larval Tissues
 Tracheal System
  Expressed in tracheal tubes
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
     Lymph Glands - Few cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms

Comments

Good probe on gel.

Probe RE28759 Links: Permalink

Genes: CG15160

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Non-Expressed
 Degraded
  Degraded partially stage 4
  Degraded completely stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Non-Expressed

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus membrane
    Proventriculus foci
   Proventriculus allover
  Expressed in midgut
  Expressed in malpighian tubules
   Malpighian tubules allover
  Expressed in hindgut
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary glands allover
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Muscles allover - Larva
tracheal system 3rd Instar Larval Tissues
 Tracheal System
  Expressed in tracheal tubes

Adult

Area Images Terms

Comments

Good probe on gel.

Probe RE28850 Links: Permalink

Genes: CG18173

Embryo

Area Images Terms

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Not expressed in fat body
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
   Hindgut allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in wing disc
   Wing discs particular pattern
   Wing disc pouch
  Expressed in leg discs
   Leg discs particular pattern
   Leg discs few cells - dots
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary glands allover
  Borderline between 'not expressed' and 'low expression'
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
  Specific testis expression localization
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Localized to larval muscle band
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva

Adult

Area Images Terms

Comments

Good probe on gel
Embryo data not good - no photos taken. May need to redo.

Probe RE29447 Links: Permalink

Genes: CG31002

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Yolk plasm localization
    Yolk plasm enrichment
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
    Exclusionary patterns
     Apical exclusion
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around yolk nuclei
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'podia'
    Perinuclear around yolk nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
   Proventriculus allover
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
   Hindgut allover
  Expressed in gastric caeca
   Subcellular localization in gastric caeca
    Gastric caeca foci
   Gastric caeca allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - Cytoplasmic foci
    Salivary gland - Small foci
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary glands allover
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
  Specific testis expression localization
   Larval testis foci
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
   Expressed in ring gland
    Ring gland allover

Adult

Area Images Terms

Comments

Good probe on gel.
Good patterns.

Probe RE11181 Links: Permalink

Genes: CG31121

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 4-5 Stage 4-5
 Non-Expressed
 Degraded
  Degraded completely stage 4
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 7
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Cell junction associated
    Basal localization
     Basal enrichment
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Basal localization
     Basal enrichment
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Specific tracheal branches
     Dorsal trunk
      Dorsal trunk foci
   Posterior spiracles
   Hindgut
    Midgut hindgut border
   Head
   Ectoderm
   Blastoderm nuclei
   Atrium
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small Foci in ectoderm
    Apical enrichment
     Apical ectoderm

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
     Few hindgut foci
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in wing disc
   Wing disc few cells - dots
  Expressed in leg discs
   Leg discs particular pattern
   Leg discs few cells - dots
  Expressed in eye disc
   Eye disc few cells - dots
   Expressed in antennal disc
    Antennal disc few cells - dots
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Localized to axons
  Expressed in brain lobes
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - Cytoplasmic foci
    Salivary gland - Small foci
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary gland base
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Specific testis expression localization
   Larval testis foci
    Testis foci outside-Larva
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
   Expressed in heart
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
     Ring gland - Few and small foci
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
     Lymph Glands - Few cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed Low - TE
   Distal tip region-TE
    Not Expressed in distal tip region -TE
  Seminal Vesicle
   Expression level-SV
    Not detected - SV
  Ejaculatory Duct
   Expression level-ED
    Not detected - ED
  Accessory Gland
   Expression level-AG
    Not detected - AG

Comments

More 'foci'
Good probe on gel. Allover with some 'small foci'...still ubiquitous.
More 'foci'
More 'foci'

Probe RE31553 Links: Permalink

Genes: CG33281

Embryo

Area Images Terms

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
   Hindgut allover
   Hindgut - Midgut border
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Brain lobes allover
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - Cytoplasmic foci
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary glands allover
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
   Expressed in lymph glands
    Lymph glands all over

Adult

Area Images Terms

Comments

Probe LD28132 Links: Permalink

Genes: CG4500

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
  Localized
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
  Localized
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
  Localized
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'foci'
   Fat body
  Localized
   Subcellular localization patterns
    Membrane associated
    Foci
     Small Foci

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Perinuclear localization
    Half moon perinuclear
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Not expressed in the intestine
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Not expressed in imaginal discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - nuclear localization
  Borderline between 'not expressed' and 'low expression'
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
     Ring gland - Few and small foci
   Expressed in ring gland
    Ring gland allover

Adult

Area Images Terms

Comments

Need more images to get the full story. In situ done before we started screening late stage embryos.

Probe RE32705 Links: Permalink

Genes: CG5021

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
   Midgut
  Weak expression (>41ms exp)
  Ubiquitous

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
  Borderline between 'not expressed' and 'low expression'
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
   Particular proventriculus area
  Expressed in malpighian tubules
   Malpighian tubules allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs few cells - dots
   Leg discs allover
  Expressed in eye disc
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Optic lobe
   Brain lobes allover
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - subnuclear
   Salivary gland - nuclear dots
   Salivary gland - membrane
   Salivary gland - apical
    Salivary gland - lumen
  Nascent transcript in salivary gland
  Expressed in salivary glands
   Salivary glands allover
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Lymph Glands
   Expressed in lymph glands
    Lymph glands all over

Adult

Area Images Terms

Comments

Probe RE33302 Links: Permalink

Genes: CG9386

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
stage 6-7 Stage 6-7
 Expressed
  Localized
   Subcellular localization patterns
    Basal localization
     Basal enrichment
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
   Muscles-embryo
   Midgut
   Foregut
   Ectoderm
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in midgut
      Small Foci in ectoderm
    Apical enrichment
     Apical ectoderm

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in malpighian tubules
   Malpighian tubules allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in eye disc
   Morphogenetic furrow
   Eye disc particular pattern
   Eye disc basal
   Expressed in antennal disc
    Antennal disc - localized outside
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - subnuclear
   Salivary gland - nuclear dots
   Salivary gland - membrane
   Salivary gland - apical
    Salivary gland - lumen
  Nascent transcript in salivary gland
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Expressed in heart
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Expressed in lymph glands
    Lymph glands all over

Adult

Area Images Terms

Comments

Good probe on gel.

Probe RE35072 Links: Permalink

Genes: CG9422

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
   Particular proventriculus area
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - Nuclear
     Midgut - Subnuclear
  Expressed in malpighian tubules
   Malpighian tubules allover
  Expressed in hindgut
   Subcellular localization in hindgut
    Nuclear in hindgut
     Hindgut - subnuclear localization
   Nascent transcript in hindgut
   Hindgut allover
   Hindgut - Midgut border
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - Cytoplasmic foci
    Cytoplasmic foci in Salivary Gland Lumen
   Salivary gland - apical
    Salivary gland - lumen
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Not expressed in larval muscles - Larva
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Not expressed in ring gland
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci

Adult

Area Images Terms

Comments

Good probe on gel.

Probe RE31002 Links: Permalink

Genes: CG9449

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Non-Expressed
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'podia'
    Yolk nuclei 'foci'
    Perinuclear around yolk nuclei
   Salivary glands
  Localized
   Subcellular localization patterns
    Perinuclear localization
    Foci
     Small Foci
      Small Foci in other tissues

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Midgut allover
  Expressed in malpighian tubules
   Malpighian tubules allover
  Expressed in hindgut
   Hindgut allover
  Borderline between 'not expressed' and 'low expression'
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs particular pattern
   Leg discs few cells - dots
   Leg discs allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Localized to axons
  Expressed in brain lobes
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - subnuclear
   Salivary gland - Perinuclear
   Salivary gland - nuclear dots
   Salivary gland - Cytoplasmic foci
   Salivary gland - apical
    Salivary gland - lumen
  Nascent transcript in salivary gland
  Expressed in salivary glands
   Salivary glands allover
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
tracheal system 3rd Instar Larval Tissues
 Tracheal System
  Expressed in tracheal tubes
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
     Ring gland - Few and small foci
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Not expressed in lymph glands

Adult

Area Images Terms

Comments

Good probe on gel.
Interesting patterns!
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions.

Probe RE44040 Links: Permalink

Genes: CR42646

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Yolk plasm localization
    Yolk plasm enrichment
   Subcellular localization patterns
    Exclusionary patterns
     Basal exclusion
     Apical exclusion
    Cytoplasmic foci
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
 Degraded
  Degraded partially stage 8
  Degradation maternal transcripts

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Nuclear localization
    Fat body - Subnuclear localization
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - Nuclear in
     Malpighian tubules - Subnuclear in
    Malpighian tubules - foci
   Nascent transcript in malpighian tubules
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
  Expressed in eye disc
   Morphogenetic furrow
   Eye disc photo-receptors
   Eye disc particular pattern
   Expressed in antennal disc
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - Cytoplasmic foci
    Salivary gland - Small foci
   Salivary gland - basal
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
    Spermatocytes -TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Cystic bulge - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
        Clusters in early cyst cell-TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
    Anterior ejaculatory duct papilla-ED
     Cytoplasmic in anterior ejaculatory papilla-ED
   Expression level-ED
    Expressed Medium - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
   Apical Enrichment-ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Clusters-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Cytoplasmic-MC

Comments

RNA forms weird clumps in yolk plasm. Should do another round of stainings to see whether this pattern is specific or an artifact. None of the other samples in the plate showed this pattern.
Re-annotated by Ronit. CR42646

Probe RE30346 Links: Permalink

Genes: CG6000 CR44097

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
    Cytoplasmic foci
 Degraded
  Degraded partially stage 4
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Muscles-embryo
   Midgut
   Hindgut
   Head
   Foregut
   Fat body
   Ectoderm
   CNS
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in other tissues
      Small Foci in muscle cells
      Small Foci in midgut
      Small Foci in hindgut
      Small Foci in ectoderm
      Small Foci in CNS
      Small Foci in Brain

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
  Expressed in hindgut
   Hindgut - Midgut border
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - Cytoplasmic foci
    Salivary gland - Small foci
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary glands allover

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Individualizing Spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
     Cytoplasmic - cyst cell
   Subcellularly localized - TE
   Expression level-TE
    Expressed Low - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      Diffuse localization-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Non-particulate - ED
    Anterior ejaculatory duct papilla-ED
     Cytoplasmic in anterior ejaculatory papilla-ED
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
   Apical Enrichment-ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
    ECM like pattern-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

The probe probably recognizes: CR44097 and CG6000.
Not every seminal vesicle (adult) shows the same result.

Probe HM_CR44945 Links: Permalink

Genes: CR44945

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Non-Expressed
 Degraded
  Degraded completely stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Non-Expressed

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Borderline between 'not expressed' and 'low expression'
intestine 3rd Instar Larval Tissues
 Intestine
  Not expressed in the intestine
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in wing disc
   Wing disc pouch
  Expressed in leg discs
   Leg discs few cells - dots
  Borderline between 'not expressed' and 'low expression'
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - allover
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
  Borderline between 'not expressed' and 'low expression'
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - Cytoplasmic foci
    Salivary gland - Small foci
   Salivary gland - apical
    Salivary gland - lumen
ovary and testis 3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Not expressed in larval ovary

Adult

Area Images Terms

Comments

Good probe on gel.
Interesting Larval Salivary Gland Pattern !
Good probe, no signal in the adult male reproductive tissues

Probe GM08252 Links: Permalink

Genes: flam flam-intron

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Zygotic
   Zygotic starting stage 1
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei associated localization
     Pronucleus-associated
     Perinuclear localization
      Perinuclear around all nuclei
     Intranuclear accumulation
      Accumulation in all nuclei
    Cell division apparatus
     Chromatin associated metaphase
   Local terms for zygotic transcripts
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Yolk nuclei
    All yolk nuclei
   Pole cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    All blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Cytoplasmic foci
    Cell division apparatus
     Chromatin associated metaphase
   Local terms for zygotic transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    All yolk nuclei
   Pole cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    All blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Cell division apparatus
     Chromatin associated metaphase
   Local terms for zygotic transcripts
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
    All yolk nuclei
   Blastoderm nuclei
    All blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around yolk nuclei
    Nuclei-associated localization
     Intranuclear accumulation
     Accumulation nuclear subregion
    Apical localization
   Local terms for zygotic transcripts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Inside Yolk nuclei
   Tracheal system
    Specific tracheal branches
   Segmented pattern
   Salivary glands
   Posterior spiracles
    Specific posterior spiracle pattern
   Midgut
   Head
    Head epidermis
   Ectoderm
   Atrium
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Accumulation nuclear subregion
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small Foci in other tissues
      Small Foci in ectoderm

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Nuclear localization
    Fat body - Subnuclear localization
  Nascent transcript in fat body
  Expressed in fat body
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Proventriculus allover
   Particular proventriculus area
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - Nuclear in
     Malpighian tubules - Subnuclear in
   Nascent transcript in malpighian tubules
   Malpighian tubules allover
  Expressed in hindgut
   Subcellular localization in hindgut
    Nuclear in hindgut
     Hindgut - subnuclear localization
    Hindgut foci
   Nascent transcript in hindgut
   Hindgut allover
  Expressed in gastric caeca
   Subcellular localization in gastric caeca
    Gastric caeca - nuclear localization
     Gastric caeca - subnuclear localization
   Nascent transcript in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs particular pattern
   Leg discs few cells - dots
  Expressed in eye disc
   Morphogenetic furrow
   Eye disc photo-receptors
   Eye disc few cells - dots
   Eye disc - center round cells
   Expressed in antennal disc
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - particular area
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - subnuclear
   Salivary gland - nuclear dots
   Salivary gland - Cytoplasmic foci
    Cytoplasmic foci in Salivary Gland Lumen
   Salivary gland - apical
    Salivary gland - lumen
  Nascent transcript in salivary gland
  Expressed in salivary glands
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Nuclear
     Ring gland - Subnuclear
   Nascent transcript in ring gland
   Expressed in ring gland

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Nuclear in Spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Sperm Tail Decoration-TCC associated
       Retracting/Coiling sperm tail-TCC associated
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
    ECM like pattern-SV
   Expression level-SV
    Expressed Medium - SV
   Cell type - SV
    Sperm Tail Decor - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Nuclear-ED
     Nuclear associated - Ejaculatory Duct
      Subnuclear - Ejaculatory Duct
       Nuclear Foci - Ejaculatory Duct
    Cytoplasmic-ED
     Membrane enriched - ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

The probe may be recognizing 16 transcripts - Including flamenco. The probe may recognize some other areas in the genome that contain a highly homologous sequence.
Amazing patterns!
Very interesting patterns in adult testes and associated tissues.

Probe RE29477 Links: Permalink

Genes: Esp

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
  Localized
   Embryonic localization patterns
    Exclusionary patterns
     Pole plasm excluded
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Basal localization
     Basal enrichment
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
     Expression in neuroblasts
     Expression in API
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around yolk nuclei
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'foci'
    Perinuclear around yolk nuclei
   Segmented pattern
   Muscles-embryo
    Visceral mesoderm
   Head
   Ectoderm
    Polarized Ectoderm
   Amnioserosa
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around amnioserosa nuclei
    Foci
     Small Foci
      Small Foci in ectoderm

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus perinuclear
   Particular proventriculus area
  Expressed in hindgut
   Subcellular localization in hindgut
    Nuclear in hindgut
     Hindgut - subnuclear localization
    Hindgut perinuclear
    Hindgut membranes
    Hindgut foci
   Nascent transcript in hindgut
   Hindgut allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in eye disc
   Morphogenetic furrow
   Eye disc photo-receptors
   Eye disc few cells - dots
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Brain lobes allover
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - vesicles
   Salivary gland - Cytoplasmic foci
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
   Expressed in heart

Adult

Area Images Terms

Comments

Good probe on gel.
Interesting RNA localization and expression patterns.

Probe GM08552 Links: Permalink

Genes: F-element{}1209 flam

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
     Pole cell exclusion
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Posterior blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
    All yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
   Tracheal system
    Tracheal lumen
    Tracheal 'podia'
    Specific tracheal branches
     Dorsal trunk
      Dorsal trunk foci
   Salivary glands
   Proventriculus
   Midgut
    Midgut subset
   Hindgut
   Head
   Ectoderm
   Atrium
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in midgut
      Small Foci in hindgut
      Small Foci in ectoderm
    Cell extensions or 'podia'

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Proventriculus allover
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - Nuclear
     Midgut - Subnuclear
   Specific midgut cells
   Nascent transcript in midgut
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - Nuclear in
     Malpighian tubules - Subnuclear in
    Malpighian tubules - foci
   Nascent transcript in malpighian tubules
  Expressed in hindgut
   Subcellular localization in hindgut
    Nuclear in hindgut
     Hindgut - subnuclear localization
    Hindgut perinuclear
   Nascent transcript in hindgut
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs few cells - dots
  Borderline between 'not expressed' and 'low expression'
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - subnuclear
   Salivary gland - Perinuclear
   Salivary gland - nuclear dots
   Salivary gland - Cytoplasmic foci
    Cytoplasmic foci in Salivary Gland Lumen
   Salivary gland - apical
    Salivary gland - lumen
  Nascent transcript in salivary gland
  Expressed in salivary glands

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Nuclear in Spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Individualizing Spermatids - TE
      Cystic bulge - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Sperm Tail Decoration-TCC associated
       Retracting/Coiling sperm tail-TCC associated
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Cell type - SV
    Sperm Tail Decor - SV
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Non-particulate - ED
    Inner lumen - ED
    Anterior ejaculatory duct papilla-ED
     Cytoplasmic in anterior ejaculatory papilla-ED
      Apical membrane enriched-Anterior ejaculatory papilla
   Expression level-ED
    Expressed High - ED
   Cell type - ED
    Cytoplasmic-ED
     Membrane enriched - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
    ECM like pattern-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Cytoplasmic-SC
    Main cells -AG
     Cytoplasmic-MC
   Apical Enrichment - MC

Comments

The probe recognizes the transposon and also flamenco and maybe some other areas in the genome that contain a highly homologous sequence.

Probe RE28596 Links: Permalink

Genes: HmgZ

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Midgut
   CNS
    Ventral nerve cord
     Polarized VNC
    Polarized CNS
  Weak expression (>41ms exp)
  Ubiquitous
  Localized
   Subcellular localization patterns
    Basal enrichment
     Basal (outside) in CNS

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Proventriculus allover
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs particular pattern
   Leg discs allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Brain lobes allover
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - apical
    Salivary gland - lumen
  Nascent transcript in salivary gland
  Expressed in salivary glands
   Salivary glands allover
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Localized to larval muscle band
   Muscles allover - Larva

Adult

Area Images Terms

Comments

Low probe on gel.

Probe RE27042 Links: Permalink

Genes: Ilp4

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
  Maternal
  Localized
   Subcellular localization patterns
    Ventral localization
    Other subcellular pattern
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
  Maternal
  Localized
   Embryonic localization patterns
    Ventral localization
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in neuroblasts
     Expression in mesoderm
  Maternal
  Localized
   Subcellular localization patterns
    Perinuclear localization
   Embryonic localization patterns
    Ventral localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   CNS
    Ventral nerve cord
   Brain
  Localized
   Subcellular localization patterns

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Nuclear localization
    Fat body - Subnuclear localization
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
     Midgut - Few foci
  Expressed in hindgut
   Subcellular localization in hindgut
    Nuclear in hindgut
     Hindgut - subnuclear localization
    Hindgut foci
  Expressed in gastric caeca
   Gastric caeca allover
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary glands allover

Adult

Area Images Terms

Comments

Probe on gel a bit low. Good in situ!

Probe RE30523 Links: Permalink

Genes: Sep1

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
stage 8-9 Stage 8-9
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
stage 10-17 Stage 10-17
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
     Proventriculus - Few foci
   Particular proventriculus area
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
  Expressed in malpighian tubules
   Malpighian tubules allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs particular pattern
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - nuclear dots
   Salivary gland - Cytoplasmic foci
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary glands allover
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Not expressed in lymph glands

Adult

Area Images Terms

Comments

Probe GM01069 Links: Permalink

Genes: cenG1A

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Ubiquitous
  Maternal
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
  Borderline between 'not expressed' and 'low expression'
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
   Borderline between 'not expressed' and 'low expression'
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
   Expressed in lymph glands
    Lymph glands all over

Adult

Area Images Terms

Comments

Probe RE28524 Links: Permalink

Genes: mRpS17

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Ubiquitous
  Maternal
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
  Maternal
stage 8-9 Stage 8-9
 Expressed
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Ubiquitous

Larva

Area Images Terms
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in wing disc
   Wing disc allover
  Expressed in leg discs
   Leg discs few cells - dots
   Leg discs allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - particular area
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Brain lobes allover
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary glands allover
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Localized to larval muscle band
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Not expressed in lymph glands

Adult

Area Images Terms

Comments

Good probe on gel.
Not a great embryo in situ.