CR42862

Links: FlyBase, BDGP InSitu, DOT, Permalink

Probe AT25528 Links: Permalink

Genes: CR32477 CR42862

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Yolk nuclei
    Subset yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
    All blastoderm nuclei
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
      Accumulation in subset nuclei
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
    Cell division apparatus
     Other cell division pattern
    Basal localization
     Basal enrichment
    Anterior localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    All blastoderm nuclei
  Strong expression (1-20ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
      Accumulation in all nuclei
    Exclusionary patterns
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in neuroblasts
     Expression in mesoderm
     Expression in ectoderm
     Expression in amnioserosa
  Strong expression (1-20ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
     Accumulation nuclear subregion
     Accumulation in subset nuclei
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
   Ectoderm
   CNS
    Ventral nerve cord
   Amnioserosa
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in ectoderm
     Nuclear in CNS
     Nuclear in amnioserosa

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Midgut allover
  Expressed in hindgut
   Hindgut allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - Cytoplasmic foci
  Expressed in salivary glands
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Expressed in lymph glands

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Distal tip region-TE
    Not Expressed in distal tip region -TE
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Individualizing Spermatids - TE
      Waste Bag - TE
      Cytoplasmic in individualizing spermatids - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Cytoplasm - TE
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed High - TE
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed High-SV
   Cell type - SV
    Cytoplasmic-SV
     Membrane enriched - SV
     Cytoplasmic Foci - SV
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Cytoplasmic-SC
      Multivesicular bodies - SC
      Cytoplasmic foci-SC
    Main cells -AG
     Cytoplasmic-MC

Comments

All nuclei. Strong in the Amnioserosa.
Enriched in the amnioserosa, the central nervous system, the ventral midline, and maybe the tracheal pits.
Anterior to posterior gradient Subnuclear localization.
The probe is low, but good. Nice insitu data!!!

Probe GH06422 Links: Permalink

Genes: CR32477 CR42862

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Yolk nuclei
    Subset yolk nuclei
     Random yolk nuclei
     Posterior yolk nuclei
   Blastoderm nuclei
    All blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
     Pole cell exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    All blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in amnioserosa
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
     Accumulation nuclear subregion
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Inside Yolk nuclei
   Ectoderm
   Dorsal vessel
   Blastoderm nuclei
   Amnioserosa
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in ectoderm
     Nuclear in CNS
     Nuclear in amnioserosa
     Accumulation nuclear subregion
     Accumulation entire nucleus

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Nuclear localization
    Fat body - Subnuclear localization
  Nascent transcript in fat body
  Expressed in fat body
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
   Particular proventriculus area
  Expressed in pharynx
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - Perinuclear
     Midgut - Half moon perinuclear midgut
    Midgut - Nuclear
     Midgut - Subnuclear
   Nascent transcript in midgut
  Expressed in hindgut
   Subcellular localization in hindgut
   Nascent transcript in hindgut
  Expressed in gastric caeca
   Subcellular localization in gastric caeca
    Gastric caeca foci
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs particular pattern
   Leg discs few cells - dots
   Leg discs - outside
  Expressed in eye disc
   Eye disc nuclear localization
    Eye disc subnuclear localization
   Eye disc few cells - dots
   Eye disc apical
   Eye disc - center round cells
   Expressed in antennal disc
    Antennal disc few cells - dots
    Antennal disc - center round cells
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - particular area
   Ventral nerve cord - nuclear localization
    Ventral nerve cord - subnuclear localization
   Localized to axons
  Expressed in brain lobes
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - Perinuclear
   Salivary gland - nuclear dots
  Nascent transcript in salivary gland
  Expressed in salivary glands
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Perinuclear localization
     Perinuclear localization in particular nuclei
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Not expressed in ring gland
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Nuclear localization
     Lymph Glands - Subnuclear localization
    Lymph Glands - Cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Waste Bag - TE
      Cystic bulge - TE
    Pigment cells -TE
     Nuclear in pigment cells -TE
      Nuclear foci in pigment cells - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Nuclear - TE
        Nuclear foci in elongating tail cyst cell - TE
     Head cyst cell - TE
      Nuclear - Head Cyst cell
     Cyst cell nuclei - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Germline stem cell
       Cytoplasmic in germline stem cells - TE
      Early cyst cell
       Cytoplasmic in early cyst cell
        Clusters in early cyst cell-TE
      Cyst stem cell
       Cytoplasmic in cyst stem cell
   Cytoplasmic
  Seminal Vesicle
   Cell type - SV
    Cytoplasmic-SV
     Membrane enriched - SV
     Cytoplasmic Foci - SV
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
    ECM like pattern-ED
    Anterior ejaculatory duct papilla-ED
     Cytoplasmic in anterior ejaculatory papilla-ED
   Expression level-ED
    Expressed Medium - ED
   Distal Enrichment - ED
   Cell type - ED
    Cytoplasmic-ED
     Membrane enriched - ED
     Cytoplasmic Foci - ED
   Apical Enrichment-ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Main cells -AG
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Basal part of nuclei. Very interesting.
Nuclear, subnuclear.
Good probe on gel.
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions'

Probe CR42862 Links: Permalink

Genes: CR42862

Embryo

Area Images Terms
stage 1-3
stage 4-5
stage 6-7
stage 8-9
stage 10-17

Larva

Area Images Terms

Adult

Area Images Terms

Comments