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Result Summary

Number of genes 31
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Probe RE74714 Links: Permalink

Genes: Pzl

Embryo

Area Images Terms

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Not expressed in fat body
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Specific testis expression localization
   Larval testis foci
   Larval spermatocytes
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Not expressed in larval muscles - Larva
  Borderline between expressed and non-expressed

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
    Spermatocytes -TE
     Cytoplasmic in Spermatocytes - TE
      Cytoplasmic puncta in spermatocyte-TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Waste Bag - TE
      Cystic bulge - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Sperm Tail Decoration-TCC associated
       Retracting/Coiling sperm tail-TCC associated
     Head cyst cell - TE
      Cytoplasmic - Head cyst cell
     Cyst cell nuclei - TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
        Diffuse in early cyst cell-TE
      Germline stem cell
       Cytoplasmic in germline stem cells - TE
     Higher expression in tip region
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
   Expression level-SV
   Cell type - SV
    Sperm Tail Decor - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      ER or Golgi associated-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed Low - AG
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Good probe on gel.
Very clear pattern on larval testes.

Probe teHJH-D7-CG6628 Links: Permalink

Genes: CG6628

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Testicular duct-TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
      Cytoplasmic foci in spermatogonium - TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Waste Bag - TE
      Cystic bulge - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Cytoplasm - TE
     Head cyst cell - TE
      Cytoplasmic - Head cyst cell
   Subcellularly localized - TE
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
        Diffuse in early cyst cell-TE
     Higher expression in tip region
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed High-SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      ER or Golgi associated-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Cell type - ED
    Nuclear-ED
     Nascent Transcript - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed High - AG
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Due to the different expression levels, the early primary spermatocytes seems no signals detected with lower magnifications; actually, there are weak expression in that area with 40X.

Probe exCR5-H5-CR31400 Links: Permalink

Genes: Heatshock RNA omega (HSR omega) HSR omega

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
      Cytoplasmic foci in spermatogonium - TE
    Spermatocytes -TE
     Cytoplasmic in Spermatocytes - TE
      Cytoplasmic puncta in spermatocyte-TE
    Spermatids -TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Pigment cells -TE
     Nuclear in pigment cells -TE
      Nuclear foci in pigment cells - TE
    Muscle cells - TE
     Nuclear in muscle cells -TE
      Nuclear foci in Muscle Cells - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Nuclear - TE
        Nuclear foci in retracting/coiling tail cyst cell - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Nuclear - TE
     Head cyst cell - TE
      Retracting/coiling Head Cyst Cell - TE
       Retracting/coiling Head Cyst Cell nuclear - TE
        Nuclear foci in retracting/coiling Head Cyst Cell - TE
      Nuclear - Head Cyst cell
       Multiple foci in Head Cyst Cell-TE
     Cyst cell nuclei - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Medium expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Nuclear-SV
     Nuclear associated - SV
      Nuclear Foci - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed High - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Probe CR41533-Su(Ste)-AS Links: Permalink

Genes: CR41533 Su(Ste)

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Testicular duct-TE
     Nuclear in Testicular Duct - TE
    Terminal Epithelium - TE
     Nuclear in terminal epithelium - TE
      Nuclear foci in terminal epithelium - TE
    Spermatogonium-TE
     Nuclear in spermatogonium-TE
      Nuclear foci in spermatogonium - TE
    Spermatocytes -TE
     Nuclear in Spermatocytes - TE
      Nuclear foci in spermatocyte - TE
     Late Spermatocytes- TE
      Nuclear in late spermatocytes - TE
       Nuclear foci in late spermatocyte - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
       Nuclear foci in round spermatids - TE
     Retracting/coiling spermatids - TE
     Elongating Spermatids - TE
      Nuclear in elongating spermatids-TE
       Nuclear foci in elongating spermatids - TE
    Pigment cells -TE
     Nuclear in pigment cells -TE
      Nuclear foci in pigment cells - TE
    Muscle cells - TE
     Nuclear in muscle cells -TE
      Nuclear foci in Muscle Cells - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Nuclear in early cyst cell
        Nuclear foci in early cyst cell - TE
       Cytoplasmic in early cyst cell
        Cytoplasmic foci in early cyst cell - TE
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed High-SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      ER or Golgi associated-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Foci - ED
      Scattered Foci - ED
   Expression level-ED
    Expressed High - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed High - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC

Comments

This probe can recognize the antisense CR41533 transcripts driven by 1360/hoppel TE promoter.

Probe teYL-A11-CR41571 Links: Permalink

Genes: CR41571

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Early elongating spermatids-TE
      Cytoplasmic in early elongating spermatids
    Sperm tail decoration - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
      Cytoplasmic - Tail cyst cell
     Head cyst cell - TE
      Cytoplasmic - Head cyst cell
   Subcellularly localized - TE
   Expression level-TE
    Expressed Low - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Germline stem cell
       Cytoplasmic in germline stem cells - TE
      Early cyst cell
       Cytoplasmic in early cyst cell
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Medium - SV
   Cell type - SV
    Nuclear-SV
    Cytoplasmic-SV
     Perinuclear - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Foci - ED
      Scattered Foci - ED
    Anterior ejaculatory duct papilla-ED
     Entry ring-ED
      Cytoplasmic in entry ring-ED
   Expression level-ED
    Expressed Medium - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nascent Transcript - SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nascent Transcript - MC
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Good probe on the gel.

Probe CR42415-Su(Ste)-AS Links: Permalink

Genes: CR42415 Su(Ste)

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatogonium-TE
     Nuclear in spermatogonium-TE
      Nascent Transcript in Spermatogonium - TE
    Spermatocytes -TE
     Nuclear in Spermatocytes - TE
      Nuclear foci in spermatocyte - TE
     Cytoplasmic in Spermatocytes - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
        Cytoplasmic foci in early cyst cell - TE
   Cytoplasmic
  Seminal Vesicle
   Expression level-SV
    Not Expressed - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Foci - ED
      Scattered Foci - ED
   Expression level-ED
    Expressed High - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed High - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nascent Transcript - SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nascent Transcript - MC
     Cytoplasmic-MC
      Cytoplasmic Foci - AG
   Basal Enrichment - MC

Comments

This probe can recognize antisense CR42415 transcript driven by 1360/hoppel TE promoter.

Probe CR42418-Su(Ste)-AS Links: Permalink

Genes: CR42418 Su(Ste)

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Testicular duct-TE
     Nuclear in Testicular Duct - TE
    Terminal Epithelium - TE
     Nuclear in terminal epithelium - TE
      Nuclear foci in terminal epithelium - TE
    Spermatogonium-TE
     Nuclear in spermatogonium-TE
      Nuclear foci in spermatogonium - TE
    Spermatocytes -TE
     Nuclear in Spermatocytes - TE
      Nuclear foci in spermatocyte - TE
     Cytoplasmic in Spermatocytes - TE
      Cytoplasmic puncta in spermatocyte-TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
       Nuclear foci in round spermatids - TE
     Individualizing Spermatids - TE
      Nuclear in individualizing spermatids - TE
       Nuclear foci in individualizing spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
       Cytoplasmic foci in individualizing spermatids - TE
      Cystic bulge - TE
     Elongating Spermatids - TE
      Nuclear in elongating spermatids-TE
       Nuclear foci in elongating spermatids - TE
    Pigment cells -TE
     Nuclear in pigment cells -TE
      Nuclear foci in pigment cells - TE
    Muscle cells - TE
     Nuclear in muscle cells -TE
      Nuclear foci in Muscle Cells - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Sperm Tail Decoration-TCC associated
       Retracting/Coiling sperm tail-TCC associated
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
     Cytoplasmic - cyst cell
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Germline stem cell
       Nuclear in germline stem cells - TE
        Nuclear foci in germline stem cells - TE
      Early cyst cell
       Cytoplasmic in early cyst cell
      Cyst stem cell
       Cytoplasmic in cyst stem cell
     Higher expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Medium - SV
   Cell type - SV
    Nuclear-SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      ER or Golgi associated-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Expression level-ED
    Expressed High - ED
   Cell type - ED
    Nuclear-ED
     Nuclear associated - Ejaculatory Duct
      Subnuclear - Ejaculatory Duct
       Nuclear Foci - Ejaculatory Duct
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG
   Basal Enrichment - MC

Comments

It can recognize the antisense CR42418 transcripts driven by 1360/hoppel TE promoter.

Probe exCR6-B1-CR43491 Links: Permalink

Genes: CR43491

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatocytes -TE
     Nuclear in Spermatocytes - TE
      Nascent Transcript in Spermatocytes - TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
      Cytoplasmic puncta in spermatocyte-TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Cystic bulge - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
   Cytoplasmic
  Seminal Vesicle
   Expression level-SV
    Not detected - SV
  Ejaculatory Duct
   Expression level-ED
    Not detected - ED
  Accessory Gland
   Expression level-AG
    Expressed High - AG
   Subcellularly localized - AG
   Nuclear
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nascent Transcript - SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nascent Transcript - MC
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

SCope had very low level expression.

Probe teCR2-E11-CR43622 Links: Permalink

Genes: CR43622

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatogonium-TE
     Nuclear in spermatogonium-TE
      Nuclear foci in spermatogonium - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Late Spermatocytes- TE
      Nuclear in late spermatocytes - TE
       Nuclear foci in late spermatocyte - TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
       Nuclear foci in round spermatids - TE
     Elongating Spermatids - TE
      Nuclear in elongating spermatids-TE
       Nuclear foci in elongating spermatids - TE
     Early elongating spermatids-TE
      Nuclear in early elongating spermatids
       Nuclear foci in early elongating spermatids - TE
    Muscle cells - TE
     Nuclear in muscle cells -TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Low - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Germline stem cell
       Cytoplasmic in germline stem cells - TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Nuclear-SV
     Nuclear associated - SV
      Nuclear Foci - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Nuclear-ED
     Nuclear associated - Ejaculatory Duct
      Subnuclear - Ejaculatory Duct
       Nuclear Foci - Ejaculatory Duct
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Very interesting RNA expression and localization patterns in adult testes and associated tissues - amazing and beautiful.

Probe teCR2-F11-CR43839 Links: Permalink

Genes: CR43839

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Expression level-TE
    Expressed Medium - TE
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Nuclear in terminal epithelium - TE
    Spermatogonium-TE
     Nuclear in spermatogonium-TE
      Nascent Transcript in Spermatogonium - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Late Spermatocytes- TE
      Nuclear in late spermatocytes - TE
       Nascent Transcript in late spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Individualizing Spermatids - TE
      Cystic bulge - TE
     Elongating Spermatids - TE
   Subcellularly localized - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Nuclear in early cyst cell
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Sperm Tail Decor - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Foci - ED
      Scattered Foci - ED
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Nuclear-ED
     Nuclear associated - Ejaculatory Duct
      Subnuclear - Ejaculatory Duct
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Expression level-AG
    Expressed Low - AG
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Non-particulate - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
    Main cells -AG
     Nuclear- MC
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Note: low probe on gel (adult testes experiment)
Note: the next-door in situ well, looks very similar. Please consider possible cross-contamination of the probe (adult testes experiment)

Probe exCR6-G3-CR43961 Links: Permalink

Genes: CR43961

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Distal tip region-TE
    Not Expressed in distal tip region -TE
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Cystic bulge - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Sperm Tail Decoration-TCC associated
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Nuclear - TE
        Nuclear foci in retracting/coiling tail cyst cell - TE
       Retracting/Coiling Tail Cyst Cell Cytoplasm - TE
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
     Head cyst cell - TE
      Cytoplasmic - Head cyst cell
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Cytoplasmic
  Seminal Vesicle
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
  Ejaculatory Duct
   Expression level-ED
    Not detected - ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Expression level-AG
    Expressed High - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nascent Transcript - SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nascent Transcript - MC
     Cytoplasmic-MC

Comments

Probe teCR3-A7-CR44071 Links: Permalink

Genes: CR44071

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Nuclear in Spermatocytes - TE
      Nuclear foci in spermatocyte - TE
      Nascent Transcript in Spermatocytes - TE
     Late Spermatocytes- TE
      Nuclear in late spermatocytes - TE
       Nuclear foci in late spermatocyte - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Low - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      Diffuse localization-SV
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Expression level-AG
    Expressed Low - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc

Comments

Probe teCR3-H5-CR44206 Links: Permalink

Genes: CR44206

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Expression level-TE
    Expressed Medium - TE
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
   Subcellularly localized - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Lower expression in tip region
  Seminal Vesicle
   Expression level-SV
    Not Expressed - SV
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Foci - ED
   Cell type - ED
    Cytoplasmic-ED
     Membrane enriched - ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Expression level-AG
    Expressed Low - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
    Main cells -AG
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Interesting RNA localization patterns in adult testes.

Probe teCR2-F10-CR44344 Links: Permalink

Genes: CR44344

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Phenotype - Testis
   Fertility phenotype - Testis
  Testis
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Nuclear in terminal epithelium - TE
      Nuclear foci in terminal epithelium - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Nuclear in Spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
      Cystic bulge - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Non-particulate - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      Diffuse localization-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed Low - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC

Comments

Interesting patterns in adult testes.
Note: not every adult testis tip shows particular expression.

Probe teSP-G1-CR44555 Links: Permalink

Genes: CR44555

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Individualizing Spermatids - TE
      Cystic bulge - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Sperm Tail Decoration-TCC associated
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Cytoplasm - TE
     Head cyst cell - TE
      Nuclear - Head Cyst cell
     Cyst cell nuclei - TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed Low - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
        Diffuse in early cyst cell-TE
     Higher expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      Diffuse localization-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Foci - ED
      Scattered Foci - ED
    Inner lumen - ED
    Anterior ejaculatory duct papilla-ED
     Entry ring-ED
      Cytoplasmic in entry ring-ED
       Cytoplasmic foci in entry ring-ED
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
   Basal Enrichment- ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed Low - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nascent Transcript - SC
    Main cells -AG
     Nuclear- MC
      Nascent Transcript - MC
     Cytoplasmic-MC

Comments

LncRNA close to Sex Peptide gene.

Probe teCR2-H11-CR44792 Links: Permalink

Genes: lncRNA:TS15

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Nuclear in Spermatocytes - TE
    Spermatids -TE
     Elongating Spermatids - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Nuclear-SV
     Nuclear associated - SV
      Nuclear Foci - SV
  Phenotype - Testis
   Fertility phenotype - Testis
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Nuclear-ED
     Nuclear associated - Ejaculatory Duct
      Subnuclear - Ejaculatory Duct
       Nuclear Foci - Ejaculatory Duct
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Expression level-AG
    Expressed Medium - AG
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc

Comments

Very interesting RNA localization patterns in testis and accessory glands - Adult

Probe teCR3-E9-CR44977 Links: Permalink

Genes: CR44977

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Nuclear in Spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Cystic bulge - TE
     Elongating Spermatids - TE
      Nuclear in elongating spermatids-TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Cell type - SV
    Cytoplasmic-SV
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Note: antisense to brat
Interesting adult testes and accessory glands patterns.

Probe teCR2-H2-CR45174 Links: Permalink

Genes: CR45174

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Testicular duct-TE
     Nuclear in Testicular Duct - TE
    Terminal Epithelium - TE
     Nuclear in terminal epithelium - TE
      Nuclear foci in terminal epithelium - TE
    Spermatogonium-TE
     Nuclear in spermatogonium-TE
      Nuclear foci in spermatogonium - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Nuclear in Spermatocytes - TE
      Nuclear foci in spermatocyte - TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
       Nuclear foci in round spermatids - TE
    Pigment cells -TE
     Nuclear in pigment cells -TE
      Nuclear foci in pigment cells - TE
    Muscle cells - TE
     Nuclear in muscle cells -TE
      Nuclear foci in Muscle Cells - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Germline stem cell
       Nuclear in germline stem cells - TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Nuclear-SV
     Nuclear associated - SV
      Nuclear Foci - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Nuclear-ED
     Nuclear associated - Ejaculatory Duct
      Subnuclear - Ejaculatory Duct
       Nuclear Foci - Ejaculatory Duct
  Accessory Gland
   Nuclear
   Expression level-AG
    Expressed Low - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Adult testis and associated tissues: very nice RNA Localization Patterns!!

Probe teCR1-C3-CR45484 Links: Permalink

Genes: CR45484 CR46499

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Nuclear in Spermatocytes - TE
    Spermatids -TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Higher expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Nuclear-SV
     Nuclear associated - SV
      Subnuclear - SV
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Nuclear-ED
     Nuclear associated - Ejaculatory Duct
      Subnuclear - Ejaculatory Duct
       Nuclear Foci - Ejaculatory Duct
      Perinuclear - Ejaculatory Duct
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Clusters-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Clusters - AG

Comments

Exceptional patterns in adult male gonads.

Probe exCR6-D3-CR45535 Links: Permalink

Genes: CR45535

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
      Cytoplasmic - Tail cyst cell
     Head cyst cell - TE
      Cytoplasmic - Head cyst cell
     Cytoplasmic - cyst cell
   Subcellularly localized - TE
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Not Expressed in distal tip region -TE
    Expressed in distal tip region - TE
   Cytoplasmic
  Seminal Vesicle
   Expression level-SV
    Not detected - SV
  Ejaculatory Duct
   Expression level-ED
    Not detected - ED
  Accessory Gland
   Expression level-AG
    Expressed High - AG
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Non-particulate - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Membrane Enriched-MC
      Cytoplasmic Foci - AG

Comments

Probe teYL-B4-CR45556 Links: Permalink

Genes: CR45556

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
      Cytoplasmic foci in spermatogonium - TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Individualizing Spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
       Cytoplasmic foci in individualizing spermatids - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Sperm tail decoration - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Sperm Tail Decoration-TCC associated
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Nuclear - TE
        Nuclear foci in retracting/coiling tail cyst cell - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
      Cytoplasmic - Tail cyst cell
     Cyst cell nuclei - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Germline stem cell
       Cytoplasmic in germline stem cells - TE
      Early cyst cell
       Cytoplasmic in early cyst cell
        Cytoplasmic foci in early cyst cell - TE
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed High-SV
   Cell type - SV
    Cytoplasmic-SV
     Perinuclear - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Foci - ED
      Scattered Foci - ED
    Anterior ejaculatory duct papilla-ED
     Entry ring-ED
      Cytoplasmic in entry ring-ED
   Expression level-ED
    Expressed High - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed High - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nascent Transcript - MC
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Good probe on the gel.

Probe teYL-A2-CR45723 Links: Permalink

Genes: CR45723

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Nuclear in terminal epithelium - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Individualizing Spermatids - TE
      Cystic bulge - TE
    Sperm tail decoration - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Sperm Tail Decoration-TCC associated
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Nuclear - TE
       Retracting/Coiling Tail Cyst Cell Cytoplasm - TE
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Nuclear - TE
        Nuclear foci in individualizing tail cyst cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
      Cytoplasmic - Tail cyst cell
     Head cyst cell - TE
      Retracting/coiling Head Cyst Cell - TE
       Retracting/coiling Head Cyst Cell nuclear - TE
        Nuclear foci in retracting/coiling Head Cyst Cell - TE
      Nuclear - Head Cyst cell
       Multiple foci in Head Cyst Cell-TE
      Cytoplasmic - Head cyst cell
     Cytoplasmic - cyst cell
     Cyst cell nuclei - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Germline stem cell
       Cytoplasmic in germline stem cells - TE
     Higher expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Medium - SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      Diffuse localization-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Foci - ED
      Scattered Foci - ED
   Expression level-ED
    Expressed High - ED
   Cell type - ED
    Cytoplasmic-ED
     Membrane enriched - ED
     Cytoplasmic Foci - ED
   Basal Enrichment- ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed High - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Cytoplasmic foci-SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC

Comments

Probe CR45796-Su(Ste)-AS Links: Permalink

Genes: CR45796 Su(Ste)

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Testicular duct-TE
     Nuclear in Testicular Duct - TE
    Terminal Epithelium - TE
     Nuclear in terminal epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatogonium-TE
     Nuclear in spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
      Cytoplasmic foci in spermatogonium - TE
    Spermatocytes -TE
     Nuclear in Spermatocytes - TE
      Nuclear foci in spermatocyte - TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
     Individualizing Spermatids - TE
      Nuclear in individualizing spermatids - TE
     Elongating Spermatids - TE
      Nuclear in elongating spermatids-TE
    Pigment cells -TE
     Nuclear in pigment cells -TE
      Nuclear foci in pigment cells - TE
    Muscle cells - TE
     Nuclear in muscle cells -TE
      Nuclear foci in Muscle Cells - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Nuclear - TE
     Head cyst cell - TE
      Nuclear - Head Cyst cell
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Germline stem cell
       Nuclear in germline stem cells - TE
        Nuclear foci in germline stem cells - TE
      Early cyst cell
       Cytoplasmic in early cyst cell
      Cyst stem cell
       Nuclear in cyst stem cell
        Nuclear foci in cyst stem cell - TE
     Higher expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed High-SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      ER or Golgi associated-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Foci - ED
      Scattered Foci - ED
   Expression level-ED
    Expressed High - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed High - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Nuclear pattern in stem cells and early spermatogonia.
This probe can recognize the antisense CR45796 transcripts driven by 1360/hoppel TE promoter.

Probe teCR3-F5-CR45805 Links: Permalink

Genes: CR45805

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Nuclear in Spermatocytes - TE
      Nuclear foci in spermatocyte - TE
    Spermatids -TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Not Expressed in distal tip region -TE
    Expressed in distal tip region - TE
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
    ECM like pattern-SV
   Expression level-SV
    Expressed Medium - SV
   Cell type - SV
    Sperm Tail Decor - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      Diffuse localization-SV
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed Low - AG
   Distal Enrichment - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Very interesting RNA localization patterns in adult testes!

Probe exCR6-C2-CR45918 Links: Permalink

Genes: CR45918

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Ejaculatory Duct
   Expression level-ED
    Not detected - ED
  Testis
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
    Spermatocytes -TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Cyst cell nuclei - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
      Cyst stem cell
     Higher expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      Diffuse localization-SV
  Accessory Gland
   Subcellularly localized - AG
   Expression level-AG
    Expressed High - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nascent Transcript - SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nascent Transcript - MC
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Probe GM08252 Links: Permalink

Genes: flam flam-intron

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Zygotic
   Zygotic starting stage 1
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei associated localization
     Pronucleus-associated
     Perinuclear localization
      Perinuclear around all nuclei
     Intranuclear accumulation
      Accumulation in all nuclei
    Cell division apparatus
     Chromatin associated metaphase
   Local terms for zygotic transcripts
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Yolk nuclei
    All yolk nuclei
   Pole cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    All blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Cytoplasmic foci
    Cell division apparatus
     Chromatin associated metaphase
   Local terms for zygotic transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    All yolk nuclei
   Pole cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    All blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Cell division apparatus
     Chromatin associated metaphase
   Local terms for zygotic transcripts
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
    All yolk nuclei
   Blastoderm nuclei
    All blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around yolk nuclei
    Nuclei-associated localization
     Intranuclear accumulation
     Accumulation nuclear subregion
    Apical localization
   Local terms for zygotic transcripts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Inside Yolk nuclei
   Tracheal system
    Specific tracheal branches
   Segmented pattern
   Salivary glands
   Posterior spiracles
    Specific posterior spiracle pattern
   Midgut
   Head
    Head epidermis
   Ectoderm
   Atrium
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Accumulation nuclear subregion
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small Foci in other tissues
      Small Foci in ectoderm

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Nuclear localization
    Fat body - Subnuclear localization
  Nascent transcript in fat body
  Expressed in fat body
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Proventriculus allover
   Particular proventriculus area
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - Nuclear in
     Malpighian tubules - Subnuclear in
   Nascent transcript in malpighian tubules
   Malpighian tubules allover
  Expressed in hindgut
   Subcellular localization in hindgut
    Nuclear in hindgut
     Hindgut - subnuclear localization
    Hindgut foci
   Nascent transcript in hindgut
   Hindgut allover
  Expressed in gastric caeca
   Subcellular localization in gastric caeca
    Gastric caeca - nuclear localization
     Gastric caeca - subnuclear localization
   Nascent transcript in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs particular pattern
   Leg discs few cells - dots
  Expressed in eye disc
   Morphogenetic furrow
   Eye disc photo-receptors
   Eye disc few cells - dots
   Eye disc - center round cells
   Expressed in antennal disc
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - particular area
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - subnuclear
   Salivary gland - nuclear dots
   Salivary gland - Cytoplasmic foci
    Cytoplasmic foci in Salivary Gland Lumen
   Salivary gland - apical
    Salivary gland - lumen
  Nascent transcript in salivary gland
  Expressed in salivary glands
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Nuclear
     Ring gland - Subnuclear
   Nascent transcript in ring gland
   Expressed in ring gland

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Y-Loop pattern - TE
     Nuclear in Spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Sperm Tail Decoration-TCC associated
       Retracting/Coiling sperm tail-TCC associated
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
    ECM like pattern-SV
   Expression level-SV
    Expressed Medium - SV
   Cell type - SV
    Sperm Tail Decor - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Nuclear-ED
     Nuclear associated - Ejaculatory Duct
      Subnuclear - Ejaculatory Duct
       Nuclear Foci - Ejaculatory Duct
    Cytoplasmic-ED
     Membrane enriched - ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

The probe may be recognizing 16 transcripts - Including flamenco. The probe may recognize some other areas in the genome that contain a highly homologous sequence.
Amazing patterns!
Very interesting patterns in adult testes and associated tissues.

Probe exCR6-F3-CR46258 Links: Permalink

Genes: CR46258

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Distal tip region-TE
    Not Expressed in distal tip region -TE
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Nuclear in Spermatocytes - TE
      Nuclear foci in spermatocyte - TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
       Nuclear foci in round spermatids - TE
     Individualizing Spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Nuclear - TE
        Nuclear foci in retracting/coiling tail cyst cell - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
     Head cyst cell - TE
      Cytoplasmic - Head cyst cell
     Cyst cell nuclei - TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed High - TE
   Cytoplasmic
  Seminal Vesicle
   Expression level-SV
    Expressed Medium - SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      Diffuse localization-SV
  Ejaculatory Duct
   Expression level-ED
    Not detected - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Clusters-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
      Cytoplasmic foci-SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Membrane Enriched-MC
      Cytoplasmic Foci - AG

Comments

Very interesting patterns, as it showed both cytoplasmic and nuclear patterns at the same type of cells, eg, main cells, spermatocytes;
A similar pattern with CR31400, tail cyst cell?
SCope had very strong signals in hub cells, but no signals by FISH.

Probe RE11449 Links: Permalink

Genes: Dys

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Membrane associated
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'foci'
    Perinuclear around yolk nuclei
   Midgut
  Localized
   Subcellular localization patterns
    Perinuclear localization
    Foci
     Small Foci
     Bigger Foci

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Not expressed in fat body
intestine 3rd Instar Larval Tissues
 Intestine
  Not expressed in the intestine
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Not expressed in imaginal discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Not expressed in nervous system
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
   Expressed in heart
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Not expressed in ring gland
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
     Lymph Glands - Few cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
      Cytoplasmic foci in spermatogonium - TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Muscle cells - TE
     Cytoplasmic in muscle cells - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Spermatocyte Tail Cyst Cell - TE
       Spermatocyte Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
     Head cyst cell - TE
      Cytoplasmic - Head cyst cell
   Subcellularly localized - TE
   Expression level-TE
    Expressed Low - TE
   Distal tip region-TE
    Not Expressed in distal tip region -TE
  Seminal Vesicle
   Subcellularly localized - SV
   Cell type - SV
    Nuclear-SV
     Nuclear associated - SV
      Subnuclear - SV
    Cytoplasmic-SV
     Membrane enriched - SV
     Cytoplasmic Foci - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Non-particulate - ED
    Anterior ejaculatory duct papilla-ED
     Cytoplasmic in anterior ejaculatory papilla-ED
      Apical membrane enriched-Anterior ejaculatory papilla
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Nuclear-ED
     Nuclear associated - Ejaculatory Duct
      Subnuclear - Ejaculatory Duct
       Nuclear Foci - Ejaculatory Duct
    Cytoplasmic-ED
     Membrane enriched - ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed Low - AG
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
    Main cells -AG
     Cytoplasmic-MC
      Cytoplasmic Foci - AG
   Apical Enrichment - MC

Comments

Interesting pattern.
Good probe on gel. Low expression. Some photos are from an older experiment.

Probe teHJH-B3-CG42666 Links: Permalink

Genes: prage

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Testicular duct-TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
      Cytoplasmic foci in spermatogonium - TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
      Cytoplasmic puncta in spermatocyte-TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
       Cytoplasmic foci in round spermatids - TE
     Individualizing Spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
      Cystic bulge - TE
      Cup Pattern - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed High - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
        Diffuse in early cyst cell-TE
     Medium expression in tip region
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      Diffuse localization-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Foci - ED
      Scattered Foci - ED
   Expression level-ED
    Expressed Medium - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed Medium - AG
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG
   Apical Enrichment - MC

Comments

Large foci along the individualizing spermatid bundles.

Probe GH10432 Links: Permalink

Genes: roX1

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Zygotic
   Zygotic starting stage 3
   Cortical nuclei
    All cortical nuclei
  Strong expression (1-20ms exp)
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Yolk nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    All blastoderm nuclei
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
      Accumulation in subset nuclei
    Exclusionary patterns
     Pole cell exclusion
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    All blastoderm nuclei
     Persistent widespread
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
      Accumulation in subset nuclei
   Local terms for zygotic transcripts
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    All blastoderm nuclei
     Persistent widespread
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear subset of nuclei
     Perinuclear around yolk nuclei
    Nuclei-associated localization
     Intranuclear accumulation
     Accumulation nuclear subregion
     Accumulation in subset nuclei
   Local terms for zygotic transcripts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Head
   CNS
    Ventral nerve cord
     Nuclear - VNC
   Brain
   Blastoderm nuclei
   Amnioserosa
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in other cells
     Nuclear in ectoderm
     Nuclear in CNS
     Nuclear in amnioserosa
     Accumulation nuclear subregion
     Accumulation entire nucleus

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Nuclear localization
    Fat body - Subnuclear localization
  Nascent transcript in fat body
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus perinuclear
     Proventriculus perinuclear - few cells
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - Nuclear
     Midgut - Subnuclear
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - Nuclear in
     Malpighian tubules - Subnuclear in
  Expressed in hindgut
   Subcellular localization in hindgut
    Nuclear in hindgut
     Hindgut - subnuclear localization
  Expressed in gastric caeca
   Subcellular localization in gastric caeca
    Gastric caeca - nuclear localization
     Gastric caeca - subnuclear localization
   Nascent transcript in gastric caeca
  Expressed in esophagus
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - nuclear localization
    Ventral nerve cord - subnuclear localization
  Expressed in brain lobes
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - subnuclear
   Salivary gland - nuclear dots
  Nascent transcript in salivary gland
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Specific testis expression localization
   Larval testis foci
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
tracheal system 3rd Instar Larval Tissues
 Tracheal System
  Expressed in tracheal tubes
lymph glands and ring glands

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Testicular duct-TE
     Nuclear in Testicular Duct - TE
    Terminal Epithelium - TE
     Nuclear in terminal epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatogonium-TE
     Nuclear in spermatogonium-TE
    Spermatocytes -TE
     Nuclear in Spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Waste Bag - TE
      Cytoplasmic in individualizing spermatids - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Pigment cells -TE
     Nuclear in pigment cells -TE
    Muscle cells - TE
     Nuclear in muscle cells -TE
     Cytoplasmic in muscle cells - TE
    Cyst cells -TE
     Tail cyst cell - TE
      Individualizing Tail Cyst Cell - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Germline stem cell
       Cytoplasmic in germline stem cells - TE
      Early cyst cell
       Cytoplasmic in early cyst cell
        Clusters in early cyst cell-TE
      Cyst stem cell
       Cytoplasmic in cyst stem cell
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Medium - SV
   Cell type - SV
    Nuclear-SV
    Cytoplasmic-SV
     Perinuclear - SV
     Cytoplasmic Foci - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Non-particulate - ED
   Expression level-ED
    Expressed Medium - ED
   Cell type - ED
    Nuclear-ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Nuclear

Probe Tiral1-DC-rox2 Links: Permalink

Genes: roX2

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Nuclear in terminal epithelium - TE
    Spermatocytes -TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
       Cytoplasmic foci in individualizing spermatids - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Pigment cells -TE
     Nuclear in pigment cells -TE
      Nuclear foci in pigment cells - TE
    Muscle cells - TE
     Nuclear in muscle cells -TE
      Nuclear foci in Muscle Cells - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Nuclear-SV
     Nuclear associated - SV
      Nuclear Foci - SV
  Ejaculatory Duct
   Expression level-ED
    Not Expressed - ED
  Accessory Gland
   Subcellularly localized - AG
   Nuclear
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Nuclear-SC
      Nuclear Foci-SC
     Cytoplasmic-SC
      Multivesicular bodies - SC
      Cytoplasmic foci-SC
    Main cells -AG
     Nuclear- MC
      Nuclear foci-mc
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

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