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Stage 8-9 / Expressed / Localized / Subcellular localization patterns / Apical localization / Apical enrichment / Diffuse apical localization
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Result Summary

Number of genes 19
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Probe SD03723 Links: Permalink

Genes: CG10805

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
    All blastoderm nuclei
     Transiently widespread
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Cell division apparatus
     Spindle midzone localization
     Chromatin associated metaphase
    Apical localization
     Apical enrichment
      Apical clusters
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Apical localization
     Apical enrichment
      Apical clusters
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Single stripe
     Expression in neuroblasts
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around blastoderm nuclei
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
    Ventral localization

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Re-annotated. Images from Eric's team.

Probe LD30834 Links: Permalink

Genes: CG14896

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei associated localization
     Perinuclear localization
      Perinuclear around yolk nuclei
      Perinuclear around cortical nuclei
    Cell division apparatus
     Microtubule-associated
   Embryonic localization patterns
    Yolk cortex localization
     Yolk cortex enrichment
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
    Cell junction associated
    Apical localization
     Apical enrichment
      Discrete apical foci
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degraded partially stage 4
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 6
   Yolk Nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
    All blastoderm nuclei
     Transiently widespread
  Localized
   Subcellular localization patterns
   Posterior localization
   Pole cell localization
    Pole cell enrichment
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Germ cell nuclei
    Subset pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in mesoderm
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical Localization Neuroblasts
   Local terms for zygotic transcripts
   Embryonic localization patterns

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Interesting localization!

Probe GM04711 Links: Permalink

Genes: CG14897

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei associated localization
     Perinuclear localization
      Perinuclear around yolk nuclei
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    All blastoderm nuclei
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
       Perinuclear around blastoderm nuclei
    Apical localization
     Apical enrichment
      Discrete apical foci
      Diffuse apical localization
   Embryonic localization patterns
 Degraded
  Degraded completely stage 4
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 7
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in mesoderm
  Medium expression (21-40ms exp)
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in neuroblasts
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
     Accumulation nuclear subregion
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical Localization Neuroblasts
   Local terms for zygotic transcripts

Larva

Area Images Terms

Adult

Area Images Terms

Comments

asymmetric distribution in neuroblasts

Probe GH26442 Links: Permalink

Genes: CG31534

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Medium expression (21-40ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Membrane associated
    Cell junction associated
   Embryonic localization patterns
    Yolk cortex localization
     Yolk cortex enrichment
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    All blastoderm nuclei
  Maternal
  Localized
   Subcellular localization patterns
    Yolk cortex localization
     Yolk cortex enrichment
    Exclusionary patterns
     Pole cell exclusion
    Cytoplasmic foci
    Cell junction associated
    Apical localization
     Apical enrichment
      Discrete apical foci
   Embryonic localization patterns
 Degraded
  Degraded partially stage 4
  Degraded completely stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Localized
   Subcellular localization patterns
    Cell junction associated
    Apical localization
     Apical enrichment
      Discrete apical foci
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Segment polarity pattern
  Localized
   Subcellular localization patterns
    Cell junction associated
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts
   Embryonic localization patterns

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Very intersting localization!

Probe GH26230 Links: Permalink

Genes: CG8603

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Embryonic localization patterns
    Exclusionary patterns
     Yolk cortex exclusion
 Degraded
  Degraded partially stage 3
  Degradation maternal transcripts
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 5
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Segmented pattern
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts
 Degraded
  Degraded completely stage 4
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Re-annotated
Small foci.
Small foci
Small foci.

Probe RE46351 Links: Permalink

Genes: Gp150

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Yolk nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    All blastoderm nuclei
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    All blastoderm nuclei
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
    Apical localization
     Apical enrichment
      Apical clusters
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in ectoderm
  Localized
   Subcellular localization patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical Localization Neuroblasts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Tracheal pits
   Ectoderm
   Blastoderm nuclei
   Amnioserosa
    Amnioserosa edges
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around tracheal nuclei
     Perinuclear around ectoderm nuclei
    Other subcellular pattern
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small Foci in amnioserosa
    Cell junction associated

Larva

Area Images Terms

Adult

Area Images Terms

Comments

The RNA also seems to accumulate apically in neuroblasts, with potential transition to basal.
Zygotic expression within cells that form furrows. Interesting localization of RNA in amnioserosa.
Zygotically expressed RNA forms clusters in apical cytoplasm.

Probe RH04426 Links: Permalink

Genes: Hsc70-4

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Strong expression (1-20ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Ventral localization
    Posterior localization
    Exclusionary patterns
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Other subcellular pattern
    Exclusionary patterns
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
 Degraded
  Degraded partially stage 7
  Degradation maternal transcripts
stage 8-9 Stage 8-9
 Expressed
  Strong expression (1-20ms exp)
  Localized
   Subcellular localization patterns
    Other subcellular pattern
    Exclusionary patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical Localization Neuroblasts
   Embryonic localization patterns
    Ventral localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Segmented pattern
   Neuroblasts
   CNS
  Localized

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Ventral nerve cord, midgut, muscles, etc.
Posterior gradient, enriched ventrally. Strong expression.
Good probe on gel.

Probe LD19609 Links: Permalink

Genes: ImpE2

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Embryonic localization patterns
    Exclusionary patterns
     Pole plasm excluded
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around blastoderm nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Apical localization
     Apical enrichment
      Diffuse apical localization
    Anterior localization
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degraded partially stage 4
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Posterior blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
    Cytoplasmic foci
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Posterior localization
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
    Anterior localization
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around blastoderm nuclei
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
    Posterior localization
    Anterior localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Specific tracheal branches
     Dorsal trunk
   Segmented pattern
   Midgut
    Midgut subset
   Head
   Ectoderm
    Polarized Ectoderm
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear polarized
     Perinuclear around tracheal nuclei
     Perinuclear around ectoderm nuclei

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Not expressed in the intestine
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Possible peripodial membrane expression
  Expressed in leg discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Localized to axons
  Expressed in brain lobes
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
  Specific testis expression localization
   Larval testis foci
    Testis foci outside-Larva
  Specific ovary expression localization
   Ovary nuclear 'dot'
   Ovary foci
  Expressed in Ovary
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
   Expressed in ring gland
    Ring gland allover

Adult

Area Images Terms

Comments

Good probe on gel.
Sub and peri nuclear with apical enrichment. Anterior cells only. Very specific and interesting.
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions'

Probe LD22004 Links: Permalink

Genes: Nrt

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Dorsal blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Ventral localization
    Other subcellular pattern
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around blastoderm nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
     Pole cell exclusion
    Dorsal localization
    Cell division apparatus
     Other cell division pattern
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Other subcellular pattern
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around blastoderm nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
    Cell division apparatus
    Apical localization
     Apical enrichment
      Discrete apical foci
      Apical clusters
   Embryonic localization patterns
    Ventral localization
    Exclusionary patterns
     Pole cell exclusion
    Dorsal localization
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in neuroblasts
     Expression in amnioserosa
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
    Nuclei-associated localization
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical Localization Neuroblasts
   Embryonic localization patterns
    Ventral localization
    Dorsal localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   PNS
   Fat body
    Fat body- specific region
     Fat body polarized
   Dorsal vessel
    Dorsal vessel specific pattern
   CNS
    Ventral nerve cord
     Polarized VNC
     Perinuclear VNC
    Polarized CNS
   Brain
   Blastoderm nuclei
   Amnioserosa
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear polarized
     Perinuclear around fat body nuclei
     Perinuclear around CNS nuclei
    Membrane associated
    Foci
     Small Foci
      Small Foci in fat body
      Small Foci in dorsal vessel

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe LD17235 Links: Permalink

Genes: RpL11

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Yolk cortex localization
     Yolk cortex enrichment
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
 Degraded
  Degraded partially stage 4
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
    Apical localization
     Apical enrichment
      Discrete apical foci
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe LD05688 Links: Permalink

Genes: Tom

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Yolk nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Other subcellular pattern
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
      Accumulation entire nucleus
    Exclusionary patterns
     Pole cell exclusion
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical clusters
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Dorsal blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Membrane associated
    Exclusionary patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around blastoderm nuclei
    Nuclei-associated localization
    Membrane associated
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Segmented pattern
   Salivary glands
   Ectoderm
   CNS
   Brain
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around CNS nuclei
    Membrane associated
    Foci
     Small Foci
      Small Foci in ectoderm
      Small Foci in CNS
      Small Foci in Brain
    Cell junction associated
    Apical enrichment
     Apical ectoderm

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
  Expressed in gastric caeca
   Subcellular localization in gastric caeca
    Gastric caeca foci
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in wing disc
   Wing disc pouch
   Wing disc few cells - dots
  Expressed in leg discs
   Leg discs few cells - dots
  Expressed in eye disc
   Morphogenetic furrow
   Eye disc photo-receptors
   Eye disc few cells - dots
   Expressed in antennal disc
    Antennal disc few cells - dots
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Localized to axons
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
   Borderline between 'not expressed' and 'low expression'
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms

Comments

Good probe on gel. Interesting patterns.
Apical localization.
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions.

Probe LD39479 Links: Permalink

Genes: asp

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei associated localization
     Pronucleus-associated
    Anterior localization
   Embryonic localization patterns
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Pair-rule pattern
    All blastoderm nuclei
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
    Anterior localization
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degraded partially stage 4
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Localized
   Subcellular localization patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in mesoderm
  Localized
   Subcellular localization patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical Localization Neuroblasts
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Neuroblasts
    Polarized Neuroblasts
   CNS
    Ventral nerve cord
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in CNS
    Apical enrichment
     Apical in other tissues

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Re-annotated
Neuroblasts

Probe LP02621 Links: Permalink

Genes: btsz

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Zygotic
   Zygotic starting stage 3
   Cortical nuclei
    All cortical nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cell division apparatus
     Spindle midzone localization
     Other cell division pattern
   Embryonic localization patterns
    Exclusionary patterns
     Pole plasm excluded
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Yolk nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Dorsal blastoderm nuclei
    All blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Other subcellular pattern
    Exclusionary patterns
     Pole cell exclusion
    Dorsal localization
    Cell division apparatus
     Spindle midzone localization
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Dorsal blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Yolk cortex exclusion
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Pole cell localization
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
    Dorsal localization
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in API
     Expression in amnioserosa
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
   PNS
   Hindgut
   Ectoderm
   Blastoderm nuclei
  Localized

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel.

Probe LD02989 Links: Permalink

Genes: mira

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    All blastoderm nuclei
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
    Cell junction associated
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    All blastoderm nuclei
  Localized
   Subcellular localization patterns
    Exclusionary patterns
    Cell junction associated
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in neuroblasts
  Localized
   Subcellular localization patterns
    Cell junction associated
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical Localization Neuroblasts
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   PNS
   Neuroblasts
    Polarized Neuroblasts
   CNS
    Ventral nerve cord
     Polarized VNC
     Perinuclear VNC
   Brain
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear polarized
     Perinuclear around PNS nuclei
     Perinuclear around CNS nuclei

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Proventriculus allover
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
   Midgut allover
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
    Hindgut Axons
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs few cells - dots
  Expressed in eye disc
   Morphogenetic furrow
   Eye disc photo-receptors
   Eye disc few cells - dots
   Eye disc basal
   Expressed in antennal disc
    Antennal disc few cells - dots
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Localized to axons
  Expressed in brain lobes
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
  Borderline between 'not expressed' and 'low expression'
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
  Specific testis expression localization
   Larval testis foci
    Testis foci outside-Larva
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
     Ring gland - Few and small foci
   Nascent transcript in ring gland
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
   Expressed in lymph glands
    Lymph glands all over

Adult

Area Images Terms

Comments

Nice apical localizatin in neuroblasts during and after delamination.
Zygotically expressed RNA localizes apically and along the lateral membrane. RNA is likely cell junction associated.
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions.

Probe GH11848 Links: Permalink

Genes: pros

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 5
   Blastoderm nuclei
    All blastoderm nuclei
     Transiently widespread
  Ubiquitous
  Maternal
 Degraded
  Degraded partially stage 4
  Degraded completely stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Single stripe
     Anterior blastoderm nuclei
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in mesoderm
  Localized
   Subcellular localization patterns
    Basal localization
     Basal enrichment
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical Localization Neuroblasts
   Local terms for zygotic transcripts
   Embryonic localization patterns

Larva

Area Images Terms

Adult

Area Images Terms

Comments

The RNA appears to localize dynamically in neuroblasts, from apical to basal.

Probe GH02614 Links: Permalink

Genes: run

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Zygotic
   Zygotic starting stage 3
   Cortical nuclei
    All cortical nuclei
  Localized
   Subcellular localization patterns
    Cell division apparatus
     Spindle midzone localization
   Local terms for zygotic transcripts
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Pair-rule pattern
    All blastoderm nuclei
     Transiently widespread
  Localized
   Subcellular localization patterns
    Cell division apparatus
     Spindle midzone localization
     Chromatin associated metaphase
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Pair-rule pattern
  Localized
   Subcellular localization patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Segment polarity pattern
  Localized
   Subcellular localization patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
   Sensory system
   Segmented pattern
   Salivary glands
   PNS
   Brain
   Blastoderm nuclei
  Localized

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in wing disc
   Wing disc pouch
   Wing disc few cells - dots
  Expressed in eye disc
   Eye disc few cells - dots
   Expressed in antennal disc
    Antennal disc few cells - dots
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Localized to axons
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Expressed in salivary glands
   Salivary glands allover
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
     Ring gland - Few and small foci
   Expressed in ring gland
    Ring gland allover
   Borderline between 'not expressed' and 'low expression'
  Lymph Glands
   Not expressed in lymph glands

Adult

Area Images Terms
Male reproductive tissues

Comments

It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions.

Probe LD23793 Links: Permalink

Genes: scra

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei associated localization
     Perinuclear localization
      Perinuclear around cortical nuclei
      Perinuclear around all nuclei
    Membrane associated
    Cell junction associated
    Cell division apparatus
     Microtubule-associated
   Embryonic localization patterns
    Yolk cortex localization
     Yolk cortex enrichment
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Cell junction associated
    Basal localization
     Basal enrichment
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
    Cell junction associated
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
 Degraded
  Degraded partially stage 7
  Degradation maternal transcripts
stage 8-9 Stage 8-9
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Cell junction associated
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical Localization Neuroblasts
   Embryonic localization patterns
 Degraded

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe LP09189 Links: Permalink

Genes: sog

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Right flanking nuclei
     Left flanking nuclei
     Dorsal blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Yolk plasm localization
    Other subcellular pattern
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
     Pole cell exclusion
    Cell division apparatus
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical clusters
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Right flanking nuclei
     Left flanking nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
     Intranuclear accumulation
      Accumulation in subset nuclei
    Exclusionary patterns
    Cytoplasmic foci
    Cell division apparatus
    Apical localization
     Apical enrichment
      Apical clusters
   Local terms for zygotic transcripts
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts
   Embryonic localization patterns
    Ventral localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   CNS
    Ventral nerve cord
     Polarized VNC
     Foci - VNC
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Membrane associated
    Foci
     Small Foci
      Small Foci in CNS
    Basal enrichment
     Basal (outside) in CNS

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Not expressed in the intestine
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in wing disc
   Wing disc pouch
   Basal wing disc localization
   Apical wing disc localization
  Expressed in leg discs
   Leg discs few cells - dots
  Expressed in eye disc
   Eye disc apical
   Expressed in antennal disc
    Antennal disc few cells - dots
    Antennal disc - center round cells
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Localized to axons
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
     Ring gland - Few and small foci
   Expressed in ring gland

Adult

Area Images Terms

Comments

Good probe on gel.
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions.

Probe RE02607 Links: Permalink

Genes: wg

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Segment polarity pattern
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Local terms for zygotic transcripts
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Segment polarity pattern
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Apical localization
     Apical enrichment
      Diffuse apical localization
      Apical Localization Neuroblasts
   Local terms for zygotic transcripts
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Segmented pattern
   Proventriculus
   Posterior spiracles
   Hindgut
    Specific hindgut area or cells
   Head
   Ectoderm
   Blastoderm nuclei
  Localized

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues

Comments