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Result Summary

Number of genes 40
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Probe LD21177 Links: Permalink

Genes: Aats-cys

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Non-Expressed
 Degraded
  Degraded completely stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Midgut
   Malpighian tubules
   Fat body
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in Malpighian tubules
      Small Foci in fat body

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Need more images to get the full story
Good probe, good plate

Probe GH09263 Links: Permalink

Genes: Aats-gly

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
 Degraded
  Degraded partially stage 9
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Proventriculus
   Muscles-embryo
    Muscles - subregion
   Midgut
   Fat body
    Fat body- specific region
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in salivary glands
      Small foci in Proventriculus
      Small Foci in muscle cells
      Small Foci in midgut
      Small Foci in fat body

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel.
I see RNA at the connection between the fat body and the muscle. Interesting Tracheal lumen, probably non-specific.

Probe LD24920 Links: Permalink

Genes: Apc2

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Pharynx
   Muscles-embryo
    Visceral mesoderm
    Muscles - subregion
   Midgut
   Ectoderm
   Blastoderm nuclei
   Atrium
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in muscle cells nuclei
     Accumulation nuclear subregion
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in muscle cells
      Small Foci in midgut
     Bigger Foci

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Partly nascent, partly sub-nuclear.
Good probe.

Probe LD20901 Links: Permalink

Genes: ApepP

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Pole cell localization
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 8-9 Stage 8-9
 Non-Expressed
 Degraded
  Degraded partially stage 8
  Degraded completely stage 9
  Degradation maternal transcripts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Ring gland
   Proventriculus
   Head
   Crystal cell
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around CNS nuclei
    Foci
     Small Foci
      Small foci in Proventriculus

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
   Particular proventriculus area
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
  Expressed in hindgut
   Hindgut allover
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Not expressed in imaginal discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - particular area
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
   Expressed in ring gland
    Ring gland allover

Adult

Area Images Terms

Comments

Good probe on gel.
Allover, lower in the pole cells. The pole cells have perinuclear small foci localization.
These may be the mushroom bodies... not sure.

Probe GH03482 Links: Permalink

Genes: CG10249

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
     Expression in API
  Localized
   Subcellular localization patterns
    Exclusionary patterns
    Cytoplasmic foci
    Apical localization
     Apical enrichment
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Segmented pattern
      Segment polarity pattern
     Expression in neuroblasts
     Anterior blastoderm nuclei
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'foci'
    Inside Yolk nuclei
   Tracheal system
    Specific tracheal branches
   Sensory system
   Segmented pattern
   Salivary glands
    Salivary glands lumen
   Ring gland
   Proventriculus
   Posterior spiracles
    Specific posterior spiracle pattern
   PNS
   Pharynx
   Muscles-embryo
    Muscles - subregion
   Hindgut
    Specific hindgut area or cells
    Midgut hindgut border
   Hemocytes
   Head
   Germ cell nuclei
    Gonads
   Foregut
   Esophagus
   Ectoderm
   CNS
    Ventral nerve cord
     Foci - VNC
     Axons
   Clypeo-labral bud
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around hemocytes
    Nuclei-associated localization
     Accumulation nuclear subregion
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small foci in Proventriculus
      Small Foci in hindgut
      Small Foci in hemocytes
      Small Foci in foregut
      Small Foci in ectoderm
      Small Foci in CNS
    Cell extensions or 'podia'
    Apical enrichment
     Apical enriched hindgut

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good strong probe. Maybe 'small foci'.
Not all zygotic, this gene is on 2R and I see -in many cases- one bright dot per nuclei.
Interesting.

Probe GH10517 Links: Permalink

Genes: CG10433

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Proventriculus
   Midgut
   Foregut
   Esophagus
   Blastoderm nuclei
   Amnioserosa
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe RE29777 Links: Permalink

Genes: CG10936

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 4-5 Stage 4-5
 Expressed
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
 Degraded
  Degraded partially stage 8
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'foci'
   Tracheal system
    Tracheal 'podia'
    Specific tracheal branches
     Dorsal trunk
      Dorsal trunk foci
   Salivary glands
   Proventriculus
   Posterior spiracles
   Pharynx
   Malpighian tubules
   Head
   Foregut
   Esophagus
   Ectoderm
   CNS
   Atrium
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in other tissues
      Small Foci in Malpighian tubules
      Small Foci in foregut
      Small Foci in ectoderm
      Small Foci in CNS

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Midgut allover
  Expressed in hindgut
   Hindgut allover
  Expressed in gastric caeca
   Gastric caeca allover
  Borderline between 'not expressed' and 'low expression'
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs particular pattern
   Leg discs allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Brain lobes allover
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Expressed in salivary glands
   Salivary glands allover
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Muscles allover - Larva
tracheal system 3rd Instar Larval Tissues
 Tracheal System
  Expressed in tracheal tubes
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
     Ring gland - Few and small foci
   Expressed in ring gland
    Ring gland allover
   Borderline between 'not expressed' and 'low expression'
  Lymph Glands
   Not expressed in lymph glands

Adult

Area Images Terms

Comments

Good probe on gel.

Probe LD15555 Links: Permalink

Genes: CG32446

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Non-Expressed
 Degraded
  Degraded partially stage 4
  Degraded completely stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
   Ring gland
   Proventriculus
   Midgut
   Crystal cell
   CNS
    Ventral nerve cord
     Foci - VNC
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in midgut
      Small Foci in CNS
      Small Foci in Brain

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe.
Foci small.

Probe RE55639 Links: Permalink

Genes: CG32732

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Basal exclusion
     Apical exclusion
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
 Degraded
  Degraded partially stage 9
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Posterior spiracles
   Muscles-embryo
    Muscles - subregion
   Midgut
   Hindgut
    Midgut hindgut border
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in muscle cells
      Small Foci in midgut

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel.

Probe RE12054 Links: Permalink

Genes: koi

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 6
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Expression in mesoderm
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Ubiquitous
 Degraded
  Degraded partially stage 9
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Muscles-embryo
    Muscles - subregion
   Midgut
   Hindgut
   Head
   Fat body
   Esophagus
   CNS
   Brain
   Blastoderm nuclei
   Anal pad
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in muscle cells nuclei
     Accumulation nuclear subregion
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in muscle cells
      Small Foci in head
      Small Foci in foregut
      Small Foci in fat body
      Small Foci in ectoderm
      Small Foci in CNS
      Small Foci in Brain

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
    Fat body - Few and small foci
  Expressed in fat body
   Fat body allover - Ubiquitous
  Borderline between 'not expressed' and 'low expression'
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
     Proventriculus - Few foci
   Proventriculus allover
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
    Malpighian tubules - Basal arc
   Malpighian tubules allover
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Not expressed in imaginal discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
   Muscles allover - Larva
   Expressed in heart
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
     Lymph Glands - Few cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Distal tip region-TE
    Expressed in distal tip region - TE
     Lower expression in tip region
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Round Tail Cyst Cell - TE
       Round Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed Low - TE
  Seminal Vesicle
   Expression level-SV
    Not detected - SV
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Subcellularly localized - ED
   Cell type - ED
    Cytoplasmic-ED
     Membrane enriched - ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed Low - AG
   Cell type - AG
    Secondary cells - AG
     Cytoplasmic-SC
    Main cells -AG
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Good probe on gel.

Probe GH03693 Links: Permalink

Genes: CG3799

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Embryonic localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole plasm excluded
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
    Cell junction associated
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Membrane associated
    Exclusionary patterns
    Cytoplasmic foci
    Cell junction associated
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
   Segmented pattern
   Salivary glands
    Salivary glands lumen
   Proventriculus
   Posterior spiracles
   Muscles-embryo
   Midgut
   Hindgut
    Specific hindgut area or cells
   Foregut
   Ectoderm
   Blastoderm nuclei
   Anal pad
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in midgut
      Small Foci in hindgut
      Small Foci in foregut
      Small Foci in fat body
      Small Foci in ectoderm
    Apical enrichment
     Apical enriched hindgut
     Apical enriched foregut

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe.

Probe GH08865 Links: Permalink

Genes: CG3975

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
     Basal exclusion
     Apical exclusion
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Exclusionary patterns
     Apical exclusion
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around yolk nuclei
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Muscles-embryo
    Visceral mesoderm
   Midgut
   Fat body
   Ectoderm
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in other tissues
      Small Foci in midgut
      Small Foci in fat body
      Small Foci in ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe GH12558 Links: Permalink

Genes: CG4389

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Strong expression (1-20ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Ubiquitous
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk cortex localization
     Yolk cortex enrichment
    Pole cell localization
     Pole cell enrichment
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
    Basal localization
     Basal enrichment
 Degraded
  Degraded partially stage 6
stage 8-9 Stage 8-9
 Expressed
  Ubiquitous
 Degraded
  Degraded partially stage 9
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Tracheal lumen
   Salivary glands
    Salivary glands lumen
   Proventriculus
   Midgut
   Malpighian tubules
   Fat body
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in midgut
      Small Foci in Malpighian tubules
      Small Foci in fat body

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel Maybe 'Pole plasm excluded'
Salivary glands, maybe non-specific.

Probe LP07955 Links: Permalink

Genes: CG4655

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
     Basal exclusion
     Apical exclusion
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Specific tracheal branches
     Dorsal trunk
      Dorsal trunk foci
   Proventriculus
   Pharynx
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small foci in Proventriculus
      Small Foci in Pharynx

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe. Small foci.

Probe GH04232 Links: Permalink

Genes: CG5397

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
     Basal exclusion
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Tracheal lumen
   Salivary glands
   Proventriculus
   Posterior spiracles
   Midgut
   Hindgut
    Midgut hindgut border
   Hemocytes
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around hemocytes
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in hemocytes
     Bigger Foci

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Foci. Not seen on the negative control.
Salivary glands and tracheal lumen, probably non-specific.
Foci. Not seen on the negative control.
Good probe, a bit weak.

Probe GH06032 Links: Permalink

Genes: CG6230

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
    Cytoplasmic foci
    Cell junction associated
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 6
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Cytoplasmic foci
    Apical localization
     Apical enrichment
      Discrete apical foci
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Proventriculus
   Pharynx
   Muscles-embryo
    Muscles - subregion
   Midgut
   Hindgut
   Fat body
    Fat body- specific region
   Esophagus
   Ectoderm
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in salivary glands
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in muscle cells
      Small Foci in midgut
      Small Foci in hindgut
      Small Foci in fat body
      Small Foci in ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe.
The RNA is all over, at the same time it is localized to foci, etc. Hard to annotate...

Probe GH09623 Links: Permalink

Genes: CG6330

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in amnioserosa
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Accumulation nuclear subregion
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Tracheal lumen
   Salivary glands
    Salivary glands lumen
   Ring gland
   Proventriculus
   Pharynx
   Foregut
   CNS
    Ventral nerve cord
     Axons
   Anal pad
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in foregut
      Small Foci in CNS
    Cell junction associated
    Cell extensions or 'podia'

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Not every 'dot' is zygotic. Gene on 3R.
Interesting late expression.
Good probe. Low maternal.

Probe RE57663 Links: Permalink

Genes: CG7272

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Non-Expressed
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'podia'
    Perinuclear around yolk nuclei
   Salivary glands
    Salivary glands lumen
   Proventriculus
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear polarized
    Foci
     Small Foci
      Small Foci in salivary glands
      Small foci in Proventriculus
    Cell extensions or 'podia'

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
   Particular proventriculus area
  Expressed in pharynx
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
  Expressed in esophagus
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area

Adult

Area Images Terms

Comments

Maybe some low expression
Maybe some low expression
Maybe some low expression
Good probe on gel.

Probe GM04053 Links: Permalink

Genes: CG8710

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
    Exclusionary patterns
     Pole cell exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
 Degraded
  Degraded partially stage 9
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Pharynx
   Muscles-embryo
   Midgut
   Ectoderm
   CNS
    Ventral nerve cord
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Membrane associated
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in midgut
      Small Foci in head
      Small Foci in ectoderm
    Basal enrichment
     Basal in midgut

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
   Midgut allover
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut basal enrichment
   Hindgut allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Not expressed in imaginal discs
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
     Lymph Glands - Few cytoplasmic foci
   Expressed in lymph glands

Adult

Area Images Terms

Comments

Good probe on gel.

Probe GH05582 Links: Permalink

Genes: blo

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Non-Expressed
stage 6-7 Stage 6-7
 Non-Expressed
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Specific tracheal branches
    Polarized tracheal localization
   Salivary glands
    Salivary glands lumen
   Proventriculus
   Posterior spiracles
    Specific posterior spiracle pattern
   Pharynx
   Midgut
    Midgut subset
    Midgut ICPs
   Hindgut
    Midgut hindgut border
   Head
   Foregut
   Esophagus
   Ectoderm
   Blastoderm nuclei
   Atrium
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in other tissues
      Small Foci in ectoderm
    Cell junction associated

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe RE31492 Links: Permalink

Genes: vari

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Apical exclusion
    Cytoplasmic foci
    Basal localization
     Basal enrichment
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Specific tracheal branches
     Dorsal trunk
      Dorsal trunk foci
   Segmented pattern
   Proventriculus
   Hindgut
   Head
    Head epidermis
   Foregut
   Esophagus
   Ectoderm
   Atrium
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small foci in Proventriculus
      Small Foci in hindgut
      Small Foci in ectoderm

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Nuclear localization
    Fat body - Subnuclear localization
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - Nuclear
     Midgut - Subnuclear
    Midgut - foci
   Specific midgut cells
   Nascent transcript in midgut
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
  Expressed in hindgut
   Hindgut allover
   Hindgut - Midgut border
  Expressed in gastric caeca
   Subcellular localization in gastric caeca
    Perinuclear gastric caeca
     Half moon perinuclear gastric caeca
    Gastric caeca - nuclear localization
     Gastric caeca - subnuclear localization
   Gastric caeca allover

Adult

Area Images Terms

Comments

Good probe on gel.
Link added manually

Probe LD13706 Links: Permalink

Genes: CG9628

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Basal exclusion
     Apical exclusion
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Non-Expressed
 Degraded
  Degraded completely stage 7
  Degradation maternal transcripts
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Zygotic starting stage 8
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Tracheal lumen
    Specific tracheal branches
   Segmented pattern
   Salivary glands
   Proventriculus
   Pharynx
   Midgut
   Malpighian tubules
   Hindgut
    Specific hindgut area or cells
   Foregut
   Esophagus
   Ectoderm
   Dorsal vessel
   CNS
    Ventral nerve cord
     Foci - VNC
   Blastoderm nuclei
   Atrium
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear polarized
     Perinuclear around tracheal nuclei
     Perinuclear around midgut nuclei
     Perinuclear around malpighian tubules
     Perinuclear around hindgut nuclei
     Perinuclear around ectoderm nuclei
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in CNS
    Cell junction associated
    Apical enrichment
     Apical enriched midgut
     Apical enriched hindgut
     Apical ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe. Nice pattern.

Probe RE30346 Links: Permalink

Genes: CG6000 CR44097

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
    Cytoplasmic foci
 Degraded
  Degraded partially stage 4
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Muscles-embryo
   Midgut
   Hindgut
   Head
   Foregut
   Fat body
   Ectoderm
   CNS
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in other tissues
      Small Foci in muscle cells
      Small Foci in midgut
      Small Foci in hindgut
      Small Foci in ectoderm
      Small Foci in CNS
      Small Foci in Brain

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - foci
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
  Expressed in hindgut
   Hindgut - Midgut border
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - Cytoplasmic foci
    Salivary gland - Small foci
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands
   Salivary glands allover

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Terminal Epithelium - TE
     Cytoplasmic in terminal epithelium - TE
    Spermatocytes -TE
     Late Spermatocytes- TE
      Cytoplasmic in late spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Individualizing Spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
     Cytoplasmic - cyst cell
   Subcellularly localized - TE
   Expression level-TE
    Expressed Low - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
      Diffuse localization-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Non-particulate - ED
    Anterior ejaculatory duct papilla-ED
     Cytoplasmic in anterior ejaculatory papilla-ED
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
      Diffuse localization-ED
   Apical Enrichment-ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
    ECM like pattern-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

The probe probably recognizes: CR44097 and CG6000.
Not every seminal vesicle (adult) shows the same result.

Probe RE55932 Links: Permalink

Genes: Chd3

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
     Basal exclusion
     Apical exclusion
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around pole cell nuclei
    Nuclei-associated localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Malpighian tubules
   Ectoderm
   CNS
    Ventral nerve cord
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in Malpighian tubules
      Small Foci in ectoderm
      Small Foci in CNS

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel.

Probe LD19584 Links: Permalink

Genes: Dl

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Yolk nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Gap-gene pattern
     Posterior blastoderm nuclei
     Dorsal blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
     Pole cell exclusion
    Apical localization
     Apical enrichment
      Diffuse apical localization
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in mesoderm
     Anterior blastoderm nuclei
  Localized
   Subcellular localization patterns
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in neuroblasts
     Expression in ectoderm
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Tracheal pits
    Specific tracheal branches
     Dorsal trunk
      Dorsal trunk foci
   Segmented pattern
   Salivary glands
    Salivary glands lumen
   Proventriculus
   PNS
   Neuroblasts
    Polarized Neuroblasts
   Midgut
    Midgut subset
   Hindgut
   Head
   Fat body
   Ectoderm
    Polarized Ectoderm
   CNS
    Ventral nerve cord
   Blastoderm nuclei
   Atrium
   Anal pad
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear polarized
     Perinuclear around PNS nuclei
     Perinuclear around ectoderm nuclei
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small foci in Proventriculus
      Small Foci in PNS
      Small Foci in hindgut
      Small Foci in head
      Small Foci in ectoderm
      Small Foci in CNS
    Cell junction associated

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in wing disc
   Wing discs particular pattern
   Wing disc few cells - dots
  Expressed in eye disc
   Eye disc few cells - dots
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
   Ventral nerve cord - allover
   Localized to axons
  Expressed in brain lobes
   Brain lobes allover
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
  Specific testis expression localization
   Larval testis foci
    Testis foci outside-Larva
muscles 3rd Instar Larval Tissues
 Larval Muscles - larva
  Expressed in larval muscles-Larva
   Sub-cellular localization in muscles-Larva
    Larval Muscles - Cytoplasmic foci
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
   Borderline between 'not expressed' and 'low expression'
  Lymph Glands
   Expressed in lymph glands
    Lymph glands all over

Adult

Area Images Terms

Comments

Good probe on gel.
It is hard to distinguish if the axons in the larval ventral nerve cord are 'axons' or 'tracheal extensions'

Probe LD21383 Links: Permalink

Genes: Dp1

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Zygotic starting stage 9
   Germ cell nuclei
    Subset pole cell nuclei
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Perinuclear around yolk nuclei
   Proventriculus
   Midgut
    Midgut subset
   Fat body
    Fat body- specific region
   Ectoderm
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around midgut nuclei
     Perinuclear around fat body nuclei
    Foci
     Small Foci
      Small foci in Proventriculus
    Apical enrichment
     Apical ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel. Good plate.

Probe LD21677 Links: Permalink

Genes: Dp1

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
    Cytoplasmic foci
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Zygotic starting stage 8
   Yolk nuclei
    Subset yolk nuclei
     Anterior yolk nuclei
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
    Specific tracheal branches
   Proventriculus
   Midgut
   Hemocytes
   Fat body
    Fat body- specific region
   Ectoderm
   Blastoderm nuclei
   Atrium
   Amnioserosa
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in ectoderm
      Small Foci in amnioserosa
    Cell junction associated
    Apical enrichment
     Apical ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Small, clear 'foci'
Good probe, good plate.

Probe E78-Ex10 Links: Permalink

Genes: E78

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 5
   Yolk nuclei
    Subset yolk nuclei
     Posterior yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Posterior blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    Subset yolk nuclei
     Dorsal yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Expression in API
     Dorsal blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Expression in mesoderm
     Expression in API
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'foci'
    Inside Yolk nuclei
   Tracheal system
    Tracheal lumen
   Segmented pattern
   Salivary glands
    Salivary glands lumen
   Proventriculus
   Posterior spiracles
   Ectoderm
   CNS
    Ventral nerve cord
   Blastoderm nuclei
   Atrium
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in other cells
     Accumulation nuclear subregion
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in other tissues
      Small Foci in CNS

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
    Fat body - Few and small foci
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Proventriculus allover
  Expressed in midgut
   Midgut allover
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - foci
   Malpighian tubules allover
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
   Hindgut allover
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in wing disc
   Wing disc pouch
   Wing disc few cells - dots
  Expressed in leg discs
   Leg discs few cells - dots
   Leg discs allover
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - allover
  Expressed in brain lobes
   Brain lobes allover
   Brain lobes - Foci or dots
  Borderline between 'not expressed' and 'low expression'
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - subnuclear
   Salivary gland - Perinuclear
   Salivary gland - Cytoplasmic foci
    Salivary gland - Small foci
  Nascent transcript in salivary gland
  Expressed in salivary glands
   Salivary glands allover
ovary and testis Adult Tissues
 Male reproductive tissues
  Testis
3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Testis allover - Larva
  Not expressed in larval ovary
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
   Expressed in ring gland
    Ring gland allover
  Lymph Glands
   Subcellular localization in lymph glands
    Lymph Glands - Cytoplasmic foci
     Lymph Glands - Few cytoplasmic foci
   Expressed in lymph glands
    Lymph glands all over

Adult

Area Images Terms

Comments

Home made probe to last exon. Covers all isoforms.
Salivary glands and tracheal lumen, probably non-specific.

Probe SD04868 Links: Permalink

Genes: Ero1L

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Expression in mesoderm
     Expression in API
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Expression in API
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Ring gland
   Proventriculus
   Midgut
   Ectoderm
   CNS
    Ventral nerve cord
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in midgut
      Small Foci in ectoderm

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Not expressed in the intestine
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Not expressed in imaginal discs
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Brain lobes - Foci or dots
  Borderline between 'not expressed' and 'low expression'
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
ovary and testis 3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Specific ovary expression localization
   Ovary foci
    Ovary foci outside
  Not expressed in larval testis
  Expressed in Ovary

Adult

Area Images Terms

Comments

Salivary glands, probably non-specific.
Good probe on gel.
Larval testis: Borderline between 'not expressed' and 'low expression'.

Probe SD09178 Links: Permalink

Genes: Mekk1

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Medium expression (21-40ms exp)
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Posterior localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around pole cell nuclei
    Cytoplasmic foci
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
 Degraded
  Degraded partially stage 9
  Degradation maternal transcripts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
   Salivary glands
    Salivary glands lumen
   Proventriculus
   Pharynx
   Midgut
   Hindgut
   Foregut
   Ectoderm
   Blastoderm nuclei
   Anal pad
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in other tissues
      Small Foci in midgut
      Small Foci in hindgut
      Small Foci in foregut
      Small Foci in ectoderm
    Apical enrichment
     Apical ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel.
All over enriched posterior.
Low levels of RNA.
Salivary glands, probably non-specific.

Probe Muc96D-RA Links: Permalink

Genes: Muc96D

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Ubiquitous
  Maternal
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Non-Expressed
 Degraded
  Degraded completely stage 6
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Anal pad
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around proventriculus nuclei
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed via HCR-FISH using 3 probe sets targeting the RA transcript isoform
-early expression may be maternal but relatively weak bordering between non-expressed and weakly expressed; there appears to be small foci in the epidermis of the anal pad and subset expression in the proventriculus (expression in salivary glands was not detected as reported by others)

Probe GH12504 Links: Permalink

Genes: Pif1A

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Yolk cortex localization
     Yolk cortex enrichment
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
   Tracheal system
    Specific tracheal branches
   Salivary glands
    Salivary glands lumen
    Salivary glands - specific region
   Proventriculus
   Muscles-embryo
   Midgut
   Hindgut
   Foregut
   Ectoderm
   CNS
    Ventral nerve cord
   Blastoderm nuclei
   Anal pad
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in salivary glands
      Small foci in Proventriculus
      Small Foci in muscle cells
      Small Foci in ectoderm
    Basal enrichment
     Basal in hindgut

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel.

Probe GH09317 Links: Permalink

Genes: betaCop

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in ectoderm
  Weak expression (>41ms exp)
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Proventriculus
   Posterior spiracles
   Foregut
   Esophagus
   Ectoderm
   Blastoderm nuclei
   Atrium
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in other tissues
      Small Foci in ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Probe LD24380 Links: Permalink

Genes: capt

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Strong expression (1-20ms exp)
  Maternal
  Localized
   Embryonic localization patterns
    Exclusionary patterns
     Pole plasm excluded
 Degraded
  Degraded partially stage 3
  Degradation maternal transcripts
stage 4-5 Stage 4-5
 Expressed
  Ubiquitous
  Maternal
stage 6-7 Stage 6-7
 Expressed
  Localized
   Subcellular localization patterns
    Basal localization
     Basal enrichment
stage 8-9 Stage 8-9
 Expressed
  Ubiquitous
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Posterior spiracles
   Muscles-embryo
    Muscles - subregion
   Hindgut
    Midgut hindgut border
   Germ cell nuclei
    Gonads
   Fat body
    Fat body- specific region
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in muscle cells
      Small Foci in fat body
      Small Foci in Brain

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Good probe on gel.

Probe LD34889 Links: Permalink

Genes: ftz-f1

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around blastoderm nuclei
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
stage 8-9 Stage 8-9
 Expressed
  Ubiquitous
 Degraded
  Degraded partially stage 9
  Degradation maternal transcripts
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
   Tracheal system
    Tracheal lumen
   Salivary glands
    Salivary glands lumen
    Salivary glands - specific region
   Proventriculus
   Posterior spiracles
   Midgut
    Midgut subset
   Hindgut
    Specific hindgut area or cells
    Midgut hindgut border
   Ectoderm
   CNS
    Ventral nerve cord
   Brain
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in salivary glands
      Small foci in Proventriculus
      Small Foci in CNS

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in gastric caeca
   Gastric caeca allover
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Not expressed in imaginal discs
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Ring gland - Subcellular localization
    Ring gland - Cytoplasmic foci
     Ring gland - Few and small foci
   Expressed in ring gland
    Ring gland allover

Adult

Area Images Terms
Male reproductive tissues

Comments

Small 'foci'
Two bands on the probe (?)
Salivary glands and tracheal lumen are probably non-specific.

Probe hh-RB Links: Permalink

Genes: hh

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Single stripe
     Segmented pattern
      Segment polarity pattern
     Posterior blastoderm nuclei
     Dorsal blastoderm nuclei
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Exclusionary patterns
     Yolk plasm exclusion
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Segment polarity pattern
     Expression in ectoderm
     Expression in API
     Anterior blastoderm nuclei
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Cytoplasmic foci
    Basal localization
     Basal enrichment
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
      Segment polarity pattern
     Expression in mesoderm
     Expression in ectoderm
     Anterior blastoderm nuclei
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Accumulation nuclear subregion
     Accumulation in subset nuclei
   Embryonic localization patterns
    Germ band localization
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Pharynx
   Hindgut
    Specific hindgut area or cells
   Head
    Head epidermis
   Esophagus
   Ectoderm
   Clypeo-labral bud
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in proventriculus
     Nuclear in pharynx
     Nuclear in ectoderm
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in hindgut
      Small Foci in ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed via HCR-FISH using 3 probe sets targeting the RB isoform transcript

Probe RE57443 Links: Permalink

Genes: ninA

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
     Basal exclusion
     Apical exclusion
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Segmented pattern
     Expression in neuroblasts
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
    Cell junction associated
    Basal localization
     Basal enrichment
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Proventriculus
   Ectoderm
   CNS
    Ventral nerve cord
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in ectoderm
      Small Foci in CNS

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Not expressed in the intestine
nervous system 3rd Instar Larval Tissues
 Nervous system
  Not expressed in nervous system
  Borderline between 'not expressed' and 'low expression'
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
lymph glands and ring glands 3rd Instar Larval Tissues
 Lymph Glands and Ring Glands
  Ring gland
   Expressed in ring gland
    Ring gland allover
   Borderline between 'not expressed' and 'low expression'

Adult

Area Images Terms

Comments

Small foci.
Good probe.

Probe GH09147 Links: Permalink

Genes: pgant3

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Yolk cortex localization
     Yolk cortex enrichment
    Cytoplasmic foci
   Embryonic localization patterns
 Degraded
  Degraded partially stage 5
  Degradation maternal transcripts
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 7
   Blastoderm nuclei
    Subset blastoderm nuclei
     Expression in API
  Weak expression (>41ms exp)
  Maternal
  Localized
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Exclusionary patterns
    Cytoplasmic foci
    Basal localization
     Basal enrichment
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
 Degraded
  Degraded partially stage 6
  Degradation maternal transcripts
stage 8-9 Stage 8-9
 Expressed
  Weak expression (>41ms exp)
  Localized
   Yolk cortex localization
    Yolk cortex enrichment
   Subcellular localization patterns
    Cytoplasmic foci
   Embryonic localization patterns
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Salivary glands
    Salivary glands lumen
   Proventriculus
   Pharynx
   Garland cell
   Foregut
   Ectoderm
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in other tissues
      Small Foci in ectoderm
    Basal enrichment
     Basal in ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

Nice muscle!
Interesting plasmatocyte sub-cellular localization.

Probe RE18781 Links: Permalink

Genes: tinc

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Basal exclusion
     Apical exclusion
    Cytoplasmic foci
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Ubiquitous
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 8-9 Stage 8-9
 Non-Expressed
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Inside Yolk nuclei
   Salivary glands
   Proventriculus
   Muscles-embryo
   Midgut
   Hindgut
    Specific hindgut area or cells
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small foci in Proventriculus
      Small Foci in other tissues
      Small Foci in muscle cells
      Small Foci in midgut

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
  Expressed in hindgut
   Subcellular localization in hindgut
    Hindgut foci
    Hindgut basal enrichment
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
   Brain lobes - Foci or dots
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Not expressed in salivary glands
ovary and testis 3rd Instar Larval Tissues
 Larval Ovary and Testis-Larva
  Not expressed in larval testis

Adult

Area Images Terms

Comments

Small foci Borderline between 'not expressed' and 'low expression'
Larval testis: Borderline between 'not expressed' and 'low expression'
Good probe on gel.
Salivary glands, probably non-specific.

Probe RE16722 Links: Permalink

Genes: yellow-h

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Subcellular localization patterns
    Yolk plasm localization
     Yolk plasm enrichment
    Exclusionary patterns
     Pole cell exclusion
     Basal exclusion
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Zygotic starting stage 7
   Blastoderm nuclei
    All blastoderm nuclei
  Ubiquitous
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 8-9 Stage 8-9
 Expressed
  Zygotic
  Ubiquitous
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Tracheal system
   Proventriculus
   Posterior spiracles
   Pharynx
   Midgut
   Hindgut
   Fat body
   Ectoderm
   Brain
   Blastoderm nuclei
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in tracheal cells
      Small foci in Proventriculus
      Small Foci in Pharynx
      Small Foci in other tissues
      Small Foci in midgut
      Small Foci in hindgut
      Small Foci in fat body
      Small Foci in ectoderm
      Small Foci in Brain

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Cytoplasmic foci-fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
  Borderline between 'not expressed' and 'low expression'
intestine 3rd Instar Larval Tissues
 Intestine
  Not expressed in the intestine
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Nascent transcript in salivary gland
  Expressed in salivary glands
   Salivary glands allover

Adult

Area Images Terms

Comments

Good probe on gel, a bit low. 4th chromosome.
Allover with small 'foci'