Probe CR43264-RA Links: Permalink

Genes: CR43264

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Yolk nuclei
    All yolk nuclei
   Pole cell nuclei
    All pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Subcellular localization patterns
    Yolk plasm localization
    Pole cell localization
     Pole cell enrichment
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
       Perinuclear around pole cell nuclei
       Perinuclear around blastoderm nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
      Accumulation in subset nuclei
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    All yolk nuclei
   Pole cell nuclei
    All pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Yolk plasm localization
   Subcellular localization patterns
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around yolk nuclei
       Perinuclear around pole cell nuclei
       Perinuclear around blastoderm nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
      Accumulation in subset nuclei
   Pole cell localization
    Pole cell enrichment
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
    All yolk nuclei
   Germ cell nuclei
    All pole cell nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Medium expression (21-40ms exp)
  Localized
   Yolk plasm localization
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
     Accumulation nuclear subregion
     Accumulation in subset nuclei
    Cytoplasmic foci
   Germ cell localization
    Germ cell enrichment
 Degraded
  Degraded partially stage 9
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
    Yolk nuclei 'foci'
    Perinuclear around yolk nuclei
   Germ cell nuclei
    Gonads
  Weak expression (>41ms exp)
  Ubiquitous
  Localized
   Subcellular localization patterns
    Foci
     Small Foci

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed via HCR-FISH using 2 probe sets targeting the RA isoform transcript
-this non-coding gene is an extremely highly expressed lncRNA in male testes according to scRNA-seq data, and exhibits a strong nuclear pattern in in embryo yolk, pole cell, and random blastoderm cells