Probe CR43314-RA Links: Permalink

Genes: CR43314

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 5
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Central band of nuclei
     Anterior blastoderm nuclei
    All blastoderm nuclei
     Transiently widespread
  Ubiquitous
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Exclusionary patterns
     Yolk plasm exclusion
     Yolk cortex exclusion
     Pole cell exclusion
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in ectoderm
     Anterior blastoderm nuclei
  Ubiquitous
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Cytoplasmic foci
   Embryonic localization patterns
    Ventral localization
    Dorsal localization
    Anterior localization
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in ectoderm
     Expression in API
     Anterior blastoderm nuclei
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Accumulation in subset nuclei
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Sensory system
   Posterior spiracles
    Specific posterior spiracle pattern
   PNS
   Midgut
    Midgut subset
   Head
    Head epidermis
   Clypeo-labral bud
   Anal pad
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in PNS
     Nuclear in midgut nuclei
     Nuclear in ectoderm
    Foci
     Small Foci
      Small Foci in PNS
      Small Foci in ectoderm
     Bigger Foci
    Apical enrichment
     Apical ectoderm

Larva

Area Images Terms

Adult

Area Images Terms

Comments

-performed via HCR-FISH using 3 probe sets targeting the RA isoform transcript
-quite unique expression pattern that appear as highly localized and nuclear small foci along a strip of the early blastoderm; and as small highly localized foci in the early anterior-dorsal head, API, ventral cephalic furrow; and lastly in ectodermal regions of late stages representing PNS patterns
-images are from two separate experiments using different hairpin-fluorophores for signal amplification but otherwise identical conditions