CR46003

Links: FlyBase, BDGP InSitu, DOT, Permalink

Probe teCR3-H6-CR46003 Links: Permalink

Genes: CR46003

Embryo

Area Images Terms

Larva

Area Images Terms

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Phenotype - Testis
   Fertility phenotype - Testis
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Cytoplasmic in individualizing spermatids - TE
       Cytoplasmic foci in individualizing spermatids - TE
      Cystic bulge - TE
    Muscle cells - TE
     Cytoplasmic in muscle cells - TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed Low - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Sperm Tail Decor - SV
    Cytoplasmic-SV
  Ejaculatory Duct
   Lumenal-ED
    Anterior ejaculatory duct papilla-ED
     Cytoplasmic in anterior ejaculatory papilla-ED
      Cytoplasmic Foci in anterior ejaculatory papilla-ED
   Expression level-ED
    Expressed High - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Diffuse foci-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Cytoplasmic-SC
      Multivesicular bodies - SC

Comments

Probe CR46003-RC Links: Permalink

Genes: CR46003

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Dorsal blastoderm nuclei
  Localized
   Subcellular localization patterns
    Ventral localization
    Nuclei-associated localization
     Perinuclear localization
      Perinuclear subset of nuclei
       Perinuclear around blastoderm nuclei
     Intranuclear accumulation
      Accumulation nuclear subregion
      Accumulation in subset nuclei
    Dorsal localization
    Cytoplasmic foci
    Basal localization
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in ectoderm
     Dorsal blastoderm nuclei
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
   Embryonic localization patterns
    Ventral localization
    Dorsal localization
 Degraded
  Degraded partially stage 7
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in ectoderm
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
    Cytoplasmic foci
   Embryonic localization patterns
    Ventral localization
 Degraded
  Degraded partially stage 8
  Degraded completely stage 9
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Segmented pattern
   Neuroblasts
    Polarized Neuroblasts
   Head
    Head epidermis
   Ectoderm
    Polarized Ectoderm
   CNS
    Ventral nerve cord
     Perinuclear VNC
     Nuclear - VNC
     Foci - VNC
    Polarized CNS
   Brain
  Localized
   Subcellular localization patterns
    Perinuclear localization
     Perinuclear around CNS nuclei
    Nuclei-associated localization
     Nuclear in CNS
    Foci
     Small Foci
      Small Foci in CNS
      Small Foci in Brain
    Basal enrichment
     Basal (outside) in CNS
     Basal (outside) in brain

Larva

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Adult

Area Images Terms

Comments

-performed via HCR-FISH using 3 probe sets targeting the RC isoform transcript
-the gene is a lncRNA with quite interesting patterns in the CNS (brain and VNC)
-seems to be expressed in the anterior transverse furrow, shown in stage 6-7 images