F-element{}1209 TE19296

Links: FlyBase, BDGP InSitu, DOT, Permalink

Probe GM08552 Links: Permalink

Genes: F-element{}1209 flam

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 4
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
  Weak expression (>41ms exp)
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation nuclear subregion
    Exclusionary patterns
     Pole cell exclusion
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Yolk Nuclei
    Subset yolk nuclei
     Random yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Posterior blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
  Ubiquitous
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Yolk nuclei
    All yolk nuclei
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Anterior blastoderm nuclei
  Weak expression (>41ms exp)
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Yolk nuclei
   Tracheal system
    Tracheal lumen
    Tracheal 'podia'
    Specific tracheal branches
     Dorsal trunk
      Dorsal trunk foci
   Salivary glands
   Proventriculus
   Midgut
    Midgut subset
   Hindgut
   Head
   Ectoderm
   Atrium
  Localized
   Subcellular localization patterns
    Foci
     Small Foci
      Small Foci in midgut
      Small Foci in hindgut
      Small Foci in ectoderm
    Cell extensions or 'podia'

Larva

Area Images Terms
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Proventriculus allover
  Expressed in midgut
   Subcellular localization in midgut
    Midgut - Nuclear
     Midgut - Subnuclear
   Specific midgut cells
   Nascent transcript in midgut
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - Nuclear in
     Malpighian tubules - Subnuclear in
    Malpighian tubules - foci
   Nascent transcript in malpighian tubules
  Expressed in hindgut
   Subcellular localization in hindgut
    Nuclear in hindgut
     Hindgut - subnuclear localization
    Hindgut perinuclear
   Nascent transcript in hindgut
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
   Leg discs few cells - dots
  Borderline between 'not expressed' and 'low expression'
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in ventral nerve cord
   Ventral nerve cord - foci or 'dots'
  Expressed in brain lobes
   Optic lobe
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - subnuclear
   Salivary gland - Perinuclear
   Salivary gland - nuclear dots
   Salivary gland - Cytoplasmic foci
    Cytoplasmic foci in Salivary Gland Lumen
   Salivary gland - apical
    Salivary gland - lumen
  Nascent transcript in salivary gland
  Expressed in salivary glands

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatocytes -TE
     Nuclear in Spermatocytes - TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Round spermatids-TE
      Nuclear in round spermatids-TE
      Cytoplasmic in round spermatids-TE
     Individualizing Spermatids - TE
      Cystic bulge - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Sperm Tail Decoration-TCC associated
       Retracting/Coiling sperm tail-TCC associated
      Retracting/Coiling Tail Cyst Cell - TE
       Retracting/Coiling Tail Cyst Cell Cytoplasm - TE
      Elongating Tail Cyst Cell - TE
       Elongating Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Nuclear
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Cell type - SV
    Sperm Tail Decor - SV
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
     Non-particulate - ED
    Inner lumen - ED
    Anterior ejaculatory duct papilla-ED
     Cytoplasmic in anterior ejaculatory papilla-ED
      Apical membrane enriched-Anterior ejaculatory papilla
   Expression level-ED
    Expressed High - ED
   Cell type - ED
    Cytoplasmic-ED
     Membrane enriched - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
    ECM like pattern-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Cytoplasmic-SC
    Main cells -AG
     Cytoplasmic-MC
   Apical Enrichment - MC

Comments

The probe recognizes the transposon and also flamenco and maybe some other areas in the genome that contain a highly homologous sequence.