bgm CG4501

Area	Images	Terms
stage 1-3		Stage 1-3  Expressed   Ubiquitous   Medium expression (21-40ms exp)   Maternal
stage 4-5		Stage 4-5  Expressed   Maternal   Localized    Subcellular localization patterns     Yolk plasm localization      Yolk plasm enrichment     Exclusionary patterns      Pole cell exclusion      Apical exclusion  Degraded   Degraded partially stage 5   Degradation maternal transcripts
stage 6-7		Stage 6-7  Expressed   Maternal   Localized    Yolk plasm localization     Yolk plasm enrichment    Yolk cortex localization     Yolk cortex enrichment    Subcellular localization patterns     Exclusionary patterns      Apical exclusion    Embryonic localization patterns     Exclusionary patterns      Pole cell exclusion
stage 8-9		Stage 8-9  Expressed   Zygotic    Zygotic starting stage 8    Blastoderm nuclei     Subset blastoderm nuclei      Single stripe      Anterior blastoderm nuclei   Localized    Subcellular localization patterns     Basal localization      Basal enrichment  Degraded   Degraded completely stage 9   Degradation maternal transcripts
stage 10-17		Stage 10-17  Expressed   Zygotic    Tracheal system     Tracheal pits    Segmented pattern    Fat body    Blastoderm nuclei

Area	Images	Terms
fat body		3rd Instar Larval Tissues  Fat body   Not expressed in fat body
intestine		3rd Instar Larval Tissues  Intestine   Expressed in pharynx   Expressed in midgut    Subcellular localization in midgut     Midgut - foci    Nascent transcript in midgut   Borderline between 'not expressed' and 'low expression'
imaginal discs		3rd Instar Larval Tissues  Imaginal discs   Not expressed in imaginal discs
nervous system		3rd Instar Larval Tissues  Nervous system   Not expressed in nervous system
salivary gland		3rd Instar Larval Tissues  Salivary gland   Not expressed in salivary glands
lymph glands and ring glands		3rd Instar Larval Tissues  Lymph Glands and Ring Glands   Ring gland    Not expressed in ring gland

Area	Images	Terms

Re-annotated

Need more photos for a better description. Original in situ done in early 2006.

Reannotated in 2024 - expression appears to be in the fat body and not the tracheal system.

Area	Images	Terms

Area	Images	Terms

Area	Images	Terms

Area	Images	Terms
stage 1-3		Stage 1-3  Expressed   Ubiquitous   Medium expression (21-40ms exp)   Maternal   Localized    Subcellular localization patterns     Cytoplasmic foci
stage 4-5		Stage 4-5  Expressed   Weak expression (>41ms exp)   Ubiquitous   Maternal  Degraded   Degraded partially stage 4   Degraded completely stage 5   Degradation maternal transcripts
stage 6-7		Stage 6-7  Non-Expressed
stage 8-9		Stage 8-9  Expressed   Zygotic    Zygotic starting stage 8    Blastoderm nuclei     Subset blastoderm nuclei      Expression in mesoderm   Localized    Subcellular localization patterns     Cytoplasmic foci    Embryonic localization patterns     Ventral localization     Germ band localization
stage 10-17		Stage 10-17  Expressed   Zygotic    Fat body     Fat body- specific region   Localized    Subcellular localization patterns     Foci      Small Foci       Small Foci in fat body

Area	Images	Terms

Area	Images	Terms

-performed via HCR-FISH using 3 probe sets targeting the RC isoform transcript

-very typical fat body expression marker but no longer expressed in late stage 16-17 embryos

-there are reports of expression in gonads and plasmatocytes/hemocytes but not clear in this particular sample