CR43314

Links: FlyBase, BDGP InSitu, DOT, Permalink

Probe exCR5-F12-CR43314 Links: Permalink

Genes: CR43314

Embryo

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Larva

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Adult

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Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
    Spermatocytes -TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
     Early elongating spermatids-TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Germline stem cell
       Cytoplasmic in germline stem cells - TE
      Early cyst cell
       Cytoplasmic in early cyst cell
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
     Cytoplasmic Foci - SV
  Ejaculatory Duct
   Expression level-ED
    Expressed Low - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Non-particulate - AG
   Expression level-AG
    Expressed Low - AG
   Cytoplasmic
   Cell type - AG
    Main cells -AG
     Cytoplasmic-MC
      Cytoplasmic Foci - AG

Comments

Probe CR43314-RA Links: Permalink

Genes: CR43314

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Non-Expressed
stage 4-5 Stage 4-5
 Expressed
  Zygotic
   Zygotic starting stage 5
   Blastoderm nuclei
    Subset blastoderm nuclei
     Random blastoderm nuclei
     Central band of nuclei
     Anterior blastoderm nuclei
    All blastoderm nuclei
     Transiently widespread
  Ubiquitous
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Exclusionary patterns
     Yolk plasm exclusion
     Yolk cortex exclusion
     Pole cell exclusion
    Cytoplasmic foci
stage 6-7 Stage 6-7
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in ectoderm
     Anterior blastoderm nuclei
  Ubiquitous
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Intranuclear accumulation
      Accumulation in subset nuclei
    Cytoplasmic foci
   Embryonic localization patterns
    Ventral localization
    Dorsal localization
    Anterior localization
stage 8-9 Stage 8-9
 Expressed
  Zygotic
   Blastoderm nuclei
    Subset blastoderm nuclei
     Ventral blastoderm nuclei
     Expression in ectoderm
     Expression in API
     Anterior blastoderm nuclei
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Accumulation in subset nuclei
stage 10-17 Stage 10-17
 Expressed
  Zygotic
   Sensory system
   Posterior spiracles
    Specific posterior spiracle pattern
   PNS
   Midgut
    Midgut subset
   Head
    Head epidermis
   Clypeo-labral bud
   Anal pad
  Localized
   Subcellular localization patterns
    Nuclei-associated localization
     Nuclear in PNS
     Nuclear in midgut nuclei
     Nuclear in ectoderm
    Foci
     Small Foci
      Small Foci in PNS
      Small Foci in ectoderm
     Bigger Foci
    Apical enrichment
     Apical ectoderm

Larva

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Adult

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Comments

-performed via HCR-FISH using 3 probe sets targeting the RA isoform transcript
-quite unique expression pattern that appear as highly localized and nuclear small foci along a strip of the early blastoderm; and as small highly localized foci in the early anterior-dorsal head, API, ventral cephalic furrow; and lastly in ectodermal regions of late stages representing PNS patterns