CR42646

Links: FlyBase, BDGP InSitu, DOT, Permalink

Probe RE44040 Links: Permalink

Genes: CR42646

Embryo

Area Images Terms
stage 1-3 Stage 1-3
 Expressed
  Weak expression (>41ms exp)
  Ubiquitous
  Maternal
stage 4-5 Stage 4-5
 Expressed
  Maternal
  Localized
   Subcellular localization patterns
    Exclusionary patterns
     Pole cell exclusion
     Apical exclusion
   Embryonic localization patterns
stage 6-7 Stage 6-7
 Expressed
  Weak expression (>41ms exp)
  Maternal
  Localized
   Yolk plasm localization
    Yolk plasm enrichment
   Subcellular localization patterns
    Exclusionary patterns
     Basal exclusion
     Apical exclusion
    Cytoplasmic foci
   Embryonic localization patterns
    Exclusionary patterns
     Pole cell exclusion
stage 8-9 Stage 8-9
 Expressed
  Zygotic
  Localized
   Subcellular localization patterns
    Cytoplasmic foci
 Degraded
  Degraded partially stage 8
  Degradation maternal transcripts

Larva

Area Images Terms
fat body 3rd Instar Larval Tissues
 Fat body
  Subcellular Localization - Fat body
   Fat body - Nuclear localization
    Fat body - Subnuclear localization
  Nascent transcript in fat body
  Expressed in fat body
   Fat body allover - Ubiquitous
intestine 3rd Instar Larval Tissues
 Intestine
  Expressed in proventriculus
   Subcellular localization in proventriculus
    Proventriculus foci
  Expressed in malpighian tubules
   Subcellular localization in malpighian tubules
    Malpighian tubules - Nuclear in
     Malpighian tubules - Subnuclear in
    Malpighian tubules - foci
   Nascent transcript in malpighian tubules
imaginal discs 3rd Instar Larval Tissues
 Imaginal discs
  Expressed in leg discs
  Expressed in eye disc
   Morphogenetic furrow
   Eye disc photo-receptors
   Eye disc particular pattern
   Expressed in antennal disc
nervous system 3rd Instar Larval Tissues
 Nervous system
  Expressed in brain lobes
   Brain lobes - Significant area
salivary gland 3rd Instar Larval Tissues
 Salivary gland
  Subcellular localization in salivary gland
   Salivary gland - membrane
   Salivary gland - Cytoplasmic foci
    Salivary gland - Small foci
   Salivary gland - basal
   Salivary gland - apical
    Salivary gland - lumen
  Expressed in salivary glands

Adult

Area Images Terms
Male reproductive tissues Adult Tissues
 Male reproductive tissues
  Testis
   Testis Cell type and stage - TE
    Spermatogonium-TE
     Cytoplasmic in spermatogonium-TE
    Spermatocytes -TE
     Cytoplasmic in Spermatocytes - TE
    Spermatids -TE
     Individualizing Spermatids - TE
      Cystic bulge - TE
     Elongating Spermatids - TE
      Cytoplasmic in elongating spermatids-TE
    Cyst cells -TE
     Tail cyst cell - TE
      Individualizing Tail Cyst Cell - TE
       Individualizing Tail Cyst Cell Cytoplasm - TE
   Subcellularly localized - TE
   Expression level-TE
    Expressed Medium - TE
   Distal tip region-TE
    Expressed in distal tip region - TE
     Specific tip region cells-TE
      Early cyst cell
       Cytoplasmic in early cyst cell
        Clusters in early cyst cell-TE
     Lower expression in tip region
   Cytoplasmic
  Seminal Vesicle
   Subcellularly localized - SV
   Lumenal-SV
    Scattered Foci - SV
   Expression level-SV
    Expressed Low - SV
   Cell type - SV
    Cytoplasmic-SV
  Ejaculatory Duct
   Subcellularly localized - ED
   Lumenal-ED
    Sleeve - ED
    Anterior ejaculatory duct papilla-ED
     Cytoplasmic in anterior ejaculatory papilla-ED
   Expression level-ED
    Expressed Medium - ED
   Cell type - ED
    Cytoplasmic-ED
     Cytoplasmic Foci - ED
   Apical Enrichment-ED
  Accessory Gland
   Subcellularly localized - AG
   Lumenal - AG
    Clusters-AG
   Expression level-AG
    Expressed Medium - AG
   Cytoplasmic
   Cell type - AG
    Secondary cells - AG
     Cytoplasmic-SC
      Multivesicular bodies - SC
    Main cells -AG
     Cytoplasmic-MC

Comments

RNA forms weird clumps in yolk plasm. Should do another round of stainings to see whether this pattern is specific or an artifact. None of the other samples in the plate showed this pattern.
Re-annotated by Ronit. CR42646